Aliases for LOC105371908 Gene

Subcategory (RNA class) for LOC105371908 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371908 Gene

  • Uncharacterized LOC105371908 3

External Ids for LOC105371908 Gene

Previous GeneCards Identifiers for LOC105371908 Gene

  • GC17U902373

Summaries for LOC105371908 Gene

GeneCards Summary for LOC105371908 Gene

LOC105371908 (Uncharacterized LOC105371908) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371908 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371908 Gene

Genomics for LOC105371908 Gene

GeneHancer (GH) Regulatory Elements for LOC105371908 Gene

Promoters and enhancers for LOC105371908 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J077839 Enhancer 0.5 ENCODE 750.6 +0.5 539 1.3 ZBTB40 HLF NFIC CEBPG FOXK2 CEBPB GLIS1 LOC105371908 HSALNG0118963
GH17J077841 Enhancer 0.4 ENCODE 750.6 -1.6 -1559 1.2 PRDM1 FOS FOSL2 JUND LOC105371908 HSALNG0118963 RF00017-2565
GH17J077840 Enhancer 0.3 ENCODE 750.6 +1.4 1366 0 ZBTB40 ZBTB33 LOC105371908 HSALNG0118963
GH17J077836 Enhancer 0.9 Ensembl ENCODE 0.6 +4.0 3996 1 FOXA1 USF2 MNT SP1 ZNF548 CEBPG FOSL2 CREB1 FOXA2 ZNF629 HSALNG0118963 SEPTIN9 LOC105371908 HSALNG0118960
GH17J077834 Enhancer 1.1 FANTOM5 ENCODE 0.4 +5.9 5920 1.1 SMARCE1 MYC MAX DACH1 MNT TEAD4 CBFA2T2 ZNF687 SMARCA4 TRIM24 SEPTIN9 PGS1 TMC6 TMC8 HSALNG0118963 LOC105371908 HSALNG0118960
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371908 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371908 Gene

Genomic Locations for LOC105371908 Gene
chr17:77,797,656-77,840,697
(GRCh38/hg38)
Size:
43,042 bases
Orientation:
Minus strand

Genomic View for LOC105371908 Gene

Genes around LOC105371908 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371908 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371908 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371908 Gene

Proteins for LOC105371908 Gene

Post-translational modifications for LOC105371908 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371908 Gene

Domains & Families for LOC105371908 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371908 Gene

Function for LOC105371908 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371908 Gene

Localization for LOC105371908 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371908 Gene

Pathways & Interactions for LOC105371908 Gene

PathCards logo

SuperPathways for LOC105371908 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105371908 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371908 Gene

Drugs & Compounds for LOC105371908 Gene

No Compound Related Data Available

Transcripts for LOC105371908 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371908 Gene

No ASD Table

Relevant External Links for LOC105371908 Gene

GeneLoc Exon Structure for
LOC105371908

No data available for mRNA/cDNA for LOC105371908 Gene

Expression for LOC105371908 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371908 Gene

Orthologs for LOC105371908 Gene

No data available for Orthologs and Evolution for LOC105371908 Gene

Paralogs for LOC105371908 Gene

No data available for Paralogs for LOC105371908 Gene

Variants for LOC105371908 Gene

Sequence variations from dbSNP and Humsavar for LOC105371908 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000000948 -- 77,816,488(-) A/T genic_upstream_transcript_variant, intron_variant
rs1000032237 -- 77,816,754(-) T/G genic_upstream_transcript_variant, intron_variant
rs1000039057 -- 77,816,577(-) G/A genic_upstream_transcript_variant, intron_variant
rs1000186549 -- 77,836,235(-) G/A genic_upstream_transcript_variant, intron_variant
rs1000241716 -- 77,818,168(-) G/A genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371908 Gene

Disorders for LOC105371908 Gene

No disorders were found for LOC105371908 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371908 Gene

Publications for LOC105371908 Gene

No publications were found for LOC105371908 Gene.

No data available for External Links for LOC105371908 Gene

Products for LOC105371908 Gene

Sources for LOC105371908 Gene