Aliases for LOC105371901 Gene

Subcategory (RNA class) for LOC105371901 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371901 Gene

  • Uncharacterized LOC105371901 3

External Ids for LOC105371901 Gene

Previous GeneCards Identifiers for LOC105371901 Gene

  • GC17U902228

Summaries for LOC105371901 Gene

GeneCards Summary for LOC105371901 Gene

LOC105371901 (Uncharacterized LOC105371901) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371901 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371901 Gene

Genomics for LOC105371901 Gene

GeneHancer (GH) Regulatory Elements for LOC105371901 Gene

Promoters and enhancers for LOC105371901 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J077137 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 750.6 -2.0 -2000 12.5 ZNF785 ZNF24 SP1 ZBTB40 ZBTB6 MLX RBPJ SMARCE1 POLR2A NR2F6 SEC14L1 LOC105371901 SEPTIN9 TMC8 ENSG00000261335 RHBDF2 RF00015-034 RNU4-47P
GH17J077114 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +17.2 17238 18.7 SIN3A SREBF1 FOXA1 MLX RBPJ SMARCE1 POLR2A USF2 NR2F6 ATF1 HSALNG0118902 SRSF2 MFSD11 METTL23 SEPTIN9 ENSG00000267546 RNU4-47P SNHG16 SPHK1 ENSG00000261335
GH17J077151 Enhancer 0.6 Ensembl ENCODE dbSUPER 0.4 -10.0 -9956 2 POLR2A RF00015-034 RNU4-47P LOC105371901 SEC14L1
GH17J077134 Enhancer 0.6 Ensembl dbSUPER 0.4 +5.7 5738 2.2 ZNF121 PRDM1 ZNF512 NR2F1 ZNF366 HSALNG0118902 LOC105371901 SEC14L1
GH17J077150 Enhancer 0.3 ENCODE dbSUPER 0.4 -8.8 -8815 0.2 SEC14L1 RF00015-034 RNU4-47P LOC105371901
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371901 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371901 Gene

Genomic Locations for LOC105371901 Gene
chr17:77,123,966-77,141,439
(GRCh38/hg38)
Size:
17,474 bases
Orientation:
Minus strand

Genomic View for LOC105371901 Gene

Genes around LOC105371901 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371901 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371901 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371901 Gene

Proteins for LOC105371901 Gene

Post-translational modifications for LOC105371901 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371901 Gene

Domains & Families for LOC105371901 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371901 Gene

Function for LOC105371901 Gene

Phenotypes From GWAS Catalog for LOC105371901 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371901 Gene

Localization for LOC105371901 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371901 Gene

Pathways & Interactions for LOC105371901 Gene

PathCards logo

SuperPathways for LOC105371901 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105371901 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371901 Gene

Drugs & Compounds for LOC105371901 Gene

No Compound Related Data Available

Transcripts for LOC105371901 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371901 Gene

No ASD Table

Relevant External Links for LOC105371901 Gene

GeneLoc Exon Structure for
LOC105371901

No data available for mRNA/cDNA for LOC105371901 Gene

Expression for LOC105371901 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371901 Gene

Orthologs for LOC105371901 Gene

No data available for Orthologs and Evolution for LOC105371901 Gene

Paralogs for LOC105371901 Gene

No data available for Paralogs for LOC105371901 Gene

Variants for LOC105371901 Gene

Sequence variations from dbSNP and Humsavar for LOC105371901 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000074142 -- 77,140,646(-) C/T genic_upstream_transcript_variant, intron_variant
rs1000422379 -- 77,129,962(-) G/A intron_variant
rs1000573784 -- 77,123,717(-) A/G downstream_transcript_variant
rs1000737894 -- 77,141,510(-) C/T upstream_transcript_variant
rs1000840998 -- 77,136,843(-) T/C intron_variant, non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371901 Gene

Disorders for LOC105371901 Gene

No disorders were found for LOC105371901 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371901 Gene

Publications for LOC105371901 Gene

No publications were found for LOC105371901 Gene.

No data available for External Links for LOC105371901 Gene

Products for LOC105371901 Gene

Sources for LOC105371901 Gene