Aliases for LOC105371888 Gene

Subcategory (RNA class) for LOC105371888 Gene

ncRNA

Aliases for LOC105371888 Gene

  • Uncharacterized LOC105371888 3

External Ids for LOC105371888 Gene

Previous GeneCards Identifiers for LOC105371888 Gene

  • GC17U902226

Summaries for LOC105371888 Gene

GeneCards Summary for LOC105371888 Gene

LOC105371888 (Uncharacterized LOC105371888) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371888 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371888 Gene

Genomics for LOC105371888 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105371888 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J073953 Enhancer 0.6 ENCODE 600.7 -2.0 -1988 0 CTCF ZIC2 ZNF341 RAD21 GABPB1 GLIS1 SP3 KLF1 L3MBTL2 EZH2 LOC105371888 LINC00469 piR-56580-012 RPL38 SDK2
GH17J073951 Enhancer 0.4 CraniofacialAtlas 600.7 -1.0 -1002 0.4 FOXA2 KLF17 FOXA1 EZH2 ENSG00000285648 LOC105371888 LINC00469 piR-56580-012 RPL38 SDK2
GH17J073952 Enhancer 0.3 ENCODE 600.7 -1.5 -1537 0.2 EZH2 L3MBTL2 LOC105371888 LINC00469 piR-56580-012 RPL38 SDK2
GH17J073954 Promoter 0.8 CraniofacialAtlas 0.7 -2.1 -2102 0.2 CTCF ZIC2 ZNF341 RAD21 ZBTB48 ZFHX2 GABPB1 GLIS1 SP3 KLF1 LINC00469 LOC105371888 piR-56580-012 RPL38 SDK2
GH17J073956 Enhancer 0.8 Ensembl ENCODE 0.4 -6.0 -6010 0.7 CTCF TEAD4 REST RAD21 SMC3 ZNF592 YY1 DPF2 ZNF654 TFAP4 LINC00469 LOC105371888 piR-56580-012 RPL38 SDK2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371888 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105371888 Gene

Genomic Locations for LOC105371888 Gene
chr17:73,925,556-73,950,860
(GRCh38/hg38)
Size:
25,305 bases
Orientation:
Minus strand

Genomic View for LOC105371888 Gene

Genes around LOC105371888 on UCSC Golden Path with GeneCards custom track
LOC105371888 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105371888 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371888 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371888 Gene

Proteins for LOC105371888 Gene

Post-translational modifications for LOC105371888 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371888 Gene

Domains & Families for LOC105371888 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371888 Gene

Function for LOC105371888 Gene

Phenotypes From GWAS Catalog for LOC105371888 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371888 Gene

Localization for LOC105371888 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371888 Gene

Pathways & Interactions for LOC105371888 Gene

PathCards logo

SuperPathways for LOC105371888 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105371888 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105371888 Gene

Drugs & Compounds for LOC105371888 Gene

No Compound Related Data Available

Transcripts for LOC105371888 Gene

LOC105371888 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371888 Gene

No ASD Table

Relevant External Links for LOC105371888 Gene

GeneLoc Exon Structure for
LOC105371888

No data available for mRNA/cDNA for LOC105371888 Gene

Expression for LOC105371888 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371888 Gene

Orthologs for LOC105371888 Gene

No data available for Orthologs and Evolution for LOC105371888 Gene

Paralogs for LOC105371888 Gene

No data available for Paralogs for LOC105371888 Gene

Variants for LOC105371888 Gene

Additional dbSNP identifiers (rs#s) for LOC105371888 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371888 Gene

Disorders for LOC105371888 Gene

No disorders were found for LOC105371888 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371888 Gene

Publications for LOC105371888 Gene

No publications were found for LOC105371888 Gene.

No data available for Mastermind for LOC105371888 Gene

Products for LOC105371888 Gene

Sources for LOC105371888 Gene