Aliases for LOC105371877 Gene
Subcategory (RNA class) for LOC105371877 Gene
ncRNA
Quality Score for this RNA gene is
13
Aliases for LOC105371877 Gene
- Uncharacterized LOC105371877 3
External Ids for LOC105371877 Gene
- Entrez Gene: 105371877
Previous GeneCards Identifiers for LOC105371877 Gene
- GC17U902136
Summaries for LOC105371877 Gene
GeneCards Summary for LOC105371877 Gene
LOC105371877 (Uncharacterized LOC105371877) is an RNA Gene, and is affiliated with the ncRNA class.
Additional gene information for LOC105371877 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371877 Gene
Genomics for LOC105371877 Gene
GeneHancer (GH) Regulatory Elements for LOC105371877 Gene
Promoters and enhancers for LOC105371877 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH17J068730 | Enhancer | 0.9 | ENCODE | 600.7 | +0.4 | 372 | 4.6 | SP1 ELF3 CBFA2T2 CEBPG PPARG ZNF639 KAT8 HMG20B IKZF1 CEBPA | LOC105371877 FAM20A ENSG00000266717 ENSG00000283376 LINC01482 | |
| GH17J068737 | Enhancer | 0.7 | Ensembl ENCODE | 0.7 | -4.5 | -4476 | 1.2 | MNT ZNF10 RXRA REST | FAM20A LOC105371877 GC17P068795 LINC01482 | |
| GH17J068758 | Enhancer | 1.2 | ENCODE dbSUPER | 0.3 | -26.1 | -26130 | 2 | SP1 CC2D1A ELF3 CTCF CEBPG RERE ZSCAN21 AHR BACH1 MAFK | LOC105371877 GC17P068795 LINC01482 | |
| GH17J068773 | Enhancer | 1.2 | ENCODE dbSUPER | 0.3 | -42.9 | -42897 | 5 | ZNF652 CC2D1A ELF3 CTCF MNT CBFA2T2 CEBPG RERE NFIB AHR | ABCA10 ABCA8 BPTF ABCA9 ABCA6 WIPI1 LINC01482 GC17P068795 LOC105371877 | |
| GH17J068749 | Enhancer | 0.8 | ENCODE dbSUPER | 0.4 | -16.4 | -16382 | 1.3 | ZNF652 CREB1 CEBPA ATF1 ATF7 MGA ATF2 ZNF580 CREM CEBPG | WIPI1 MIR635 FAM20A LOC105371877 GC17P068795 LINC01482 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC105371877 on UCSC Golden Path with GeneCards custom track
Genomic Locations for LOC105371877 Gene
Genomic Locations for LOC105371877 Gene
- chr17:68,715,487-68,733,524
- (GRCh38/hg38)
- Size:
- 18,038 bases
- Orientation:
- Minus strand
Genomic View for LOC105371877 Gene
Genes around LOC105371877 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 17q24.2 by Entrez Gene
LOC105371877 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC105371877 Gene
Proteins for LOC105371877 Gene
Post-translational modifications for LOC105371877 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105371877
- Origene Custom Protein Services for LOC105371877
No data available for DME Specific Peptides for LOC105371877 Gene
Domains & Families for LOC105371877 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371877 Gene
Function for LOC105371877 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for LOC105371877
-
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371877 Gene
Localization for LOC105371877 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371877 Gene
Transcripts for LOC105371877 Gene
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LOC105371877 Gene
- GeneLoc Exon Structure for
- LOC105371877
No data available for mRNA/cDNA for LOC105371877 Gene
Expression for LOC105371877 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371877 Gene
Orthologs for LOC105371877 Gene
No data available for Orthologs and Evolution for LOC105371877 Gene
Paralogs for LOC105371877 Gene
No data available for Paralogs for LOC105371877 Gene
Variants for LOC105371877 Gene
| SNP ID | Clin | Chr 17 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000069115 | -- | 68,717,969(-) | T/C | intron_variant | |
| rs1000138967 | -- | 68,734,865(-) | C/T | upstream_transcript_variant | |
| rs1000187478 | -- | 68,731,854(-) | C/T | genic_upstream_transcript_variant, intron_variant | |
| rs1000798652 | -- | 68,729,734(-) | G/A | genic_upstream_transcript_variant, intron_variant | |
| rs1000878423 | -- | 68,720,500(-) | A/G | intron_variant |
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371877 Gene
Disorders for LOC105371877 Gene
No disorders were found for LOC105371877 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371877 Gene
Publications for LOC105371877 Gene
No publications were found for LOC105371877 Gene.
No data available for External Links for LOC105371877 Gene
Products for LOC105371877 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105371877
- Origene Custom Protein Services for LOC105371877
- Browse OriGene Inhibitory RNA Products For LOC105371877
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LOC105371877
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LOC105371877
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Cyagen custom Knockout/knockin (KOKI) mouse models for LOC105371877
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LOC105371877
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LOC105371877
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LOC105371877
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LOC105371877
Sources for LOC105371877 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) UniGene
- (28) AceView
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) HGMD
- (45) GAD
- (46) BGMUT
- (47) HuGE
- (48) Atlas
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) OCA
- (69) Proteopedia
- (70) MOPED
- (71) neXtProt
- (72) Reactome
- (73) GeneGo (Thomson Reuters)
- (74) fRNAdb
- (75) DISEASES
- (76) SIMAP
- (77) GenomeRNAi
- (78) LifeMap
- (79) miRTarBase
- (80) MalaCards
- (81) Invitrogen
- (82) BitterDB
- (83) ESI-BIO
- (84) RefSeq
- (85) BioSystems
- (86) MaxQB
- (87) IUPHAR
- (88) BioGPS
- (89) Illumina
- (90) COMPARTMENTS
- (91) HOMER
- (92) PaxDb
- (93) ApexBio
- (94) Addgene
- (95) antibodies-online
- (96) CYP
- (97) NONCODE
- (98) SwitchGear Genomics
- (99) TreeFam
- (100) PathCards
- (101) GeneReviews
- (102) GeneTex
- (103) Taconic Biosciences
- (104) GTEx
- (105) ProteomicsDB
- (106) SCBT
- (107) DGIdb
- (108) ClinicalTrials
- (109) FDA Approved Drugs
- (110) RVIS
- (111) SIGNOR
- (112) diseasecard
- (113) NIH Rare Diseases
- (114) Orphanet
- (115) UMLS
- (116) GTR
- (117) Disease Ontology
- (118) Genetics Home Reference
- (119) MeSH
- (120) MedlinePlus
- (121) CDC
- (122) NINDS
- (123) NCBI Bookshelf
- (124) ClinVar
- (125) Gene Damage Index
- (126) ViGene Biosciences
- (127) HPO
- (128) UDN
- (129) VISTA
- (130) FANTOM5
- (131) ENCODE
- (132) ProSci
- (133) Horizon
- (134) NURSA
- (135) IID
- (136) Cyagen
- (137) VectorBuilder
- (138) SNPedia
- (139) BRCA Exchange
- (140) St John's Lab
- (141) CIViC
- (142) ProteoGenix
- (143) dbSUPER
- (144) TISSUES
- (145) Gene ORGANizer
- (146) abm
- (147) CrownBio
- (148) Human Protein Atlas
- (149) GWAS Catalog
- (150) Monarch Initiative
- (151) DataMed
- (152) HumanCyc
- (153) genomics-online
- (154) UCNEbase
- (155) EPDnew
- (156) Applied Biosystems
- (157) GlyConnect
- (158) Aminode
- (159) GeneCopoeia
- (160) GPS-Prot
- (161) RNACentral
- (162) LncRNADisease
- (163) LOVD
- (164) miR2Disease
- (165) DiseaseEnhancer
- (166) Boster Bio
- (167) Biorbyt
- (168) Biocompare
- (169) Mastermind