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Aliases for LOC105371864 Gene

Subcategory (RNA class) for LOC105371864 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371864 Gene

  • Uncharacterized LOC105371864 3

External Ids for LOC105371864 Gene

Previous GeneCards Identifiers for LOC105371864 Gene

  • GC17U902265

Summaries for LOC105371864 Gene

GeneCards Summary for LOC105371864 Gene

LOC105371864 (Uncharacterized LOC105371864) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371864 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371864 Gene

Genomics for LOC105371864 Gene

GeneHancer (GH) Regulatory Elements for LOC105371864 Gene

Promoters and enhancers for LOC105371864 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J065099 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 600.7 +0.3 290 2.4 MTA3 SP1 CC2D1A CTCF NKRF MLLT1 GTF2F1 ZSCAN21 ZBTB7A SP7 LOC105371864 LOC100507002 RGS9 DDX5 POLG2 PLEKHM1P1 ENSG00000265982 CEP95 SLC16A6P1 ERN1
GH17J065087 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +12.1 12073 2.1 ZNF121 SP1 RXRA YY1 RAD21 HNF4A NFIA REST HNF4G GNA13 SLC16A6P1 GC17P065092 LOC105371864 GC17M065077
GH17J065092 Enhancer 0.7 Ensembl 0.4 +8.2 8248 0.5 MAFK SP1 SMARCA4 CREB1 TARDBP CTBP1 FOXA2 NFE2 JUND FOS GC17P065092 LOC105371864
GH17J065078 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.3 +21.6 21611 1.8 PRDM1 FOSL2 RFX1 FOS SMARCE1 MTA2 GC17M065077 SLC16A6P1 GC17P065092 LOC105371864
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371864 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371864 Gene

Genomic Locations for LOC105371864 Gene
chr17:65,078,158-65,100,712
(GRCh38/hg38)
Size:
22,555 bases
Orientation:
Minus strand

Genomic View for LOC105371864 Gene

Genes around LOC105371864 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371864 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371864 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371864 Gene

Proteins for LOC105371864 Gene

Post-translational modifications for LOC105371864 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371864 Gene

Domains & Families for LOC105371864 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371864 Gene

Function for LOC105371864 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371864 Gene

Localization for LOC105371864 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371864 Gene

Pathways & Interactions for LOC105371864 Gene

PathCards logo

SuperPathways for LOC105371864 Gene

No Data Available

Interacting Proteins for LOC105371864 Gene

Gene Ontology (GO) - Biological Process for LOC105371864 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371864 Gene

Drugs & Compounds for LOC105371864 Gene

No Compound Related Data Available

Transcripts for LOC105371864 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371864 Gene

No ASD Table

Relevant External Links for LOC105371864 Gene

GeneLoc Exon Structure for
LOC105371864

No data available for mRNA/cDNA for LOC105371864 Gene

Expression for LOC105371864 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371864 Gene

Orthologs for LOC105371864 Gene

No data available for Orthologs and Evolution for LOC105371864 Gene

Paralogs for LOC105371864 Gene

No data available for Paralogs for LOC105371864 Gene

Variants for LOC105371864 Gene

Sequence variations from dbSNP and Humsavar for LOC105371864 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000153058 -- 65,080,903(-) C/T genic_downstream_transcript_variant, intron_variant
rs1000205782 -- 65,092,823(-) C/A intron_variant
rs1000237403 -- 65,098,337(-) G/T genic_upstream_transcript_variant, intron_variant
rs1000256979 -- 65,081,845(-) G/A genic_downstream_transcript_variant, intron_variant
rs1000288064 -- 65,098,012(-) G/A/C genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371864 Gene

Disorders for LOC105371864 Gene

No disorders were found for LOC105371864 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371864 Gene

Publications for LOC105371864 Gene

No publications were found for LOC105371864 Gene.

No data available for External Links for LOC105371864 Gene

Products for LOC105371864 Gene

Sources for LOC105371864 Gene

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