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Aliases for LOC105371856 Gene

Subcategory (RNA class) for LOC105371856 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105371856 Gene

  • Uncharacterized LOC105371856 3

External Ids for LOC105371856 Gene

Previous GeneCards Identifiers for LOC105371856 Gene

  • GC17U902209

Summaries for LOC105371856 Gene

GeneCards Summary for LOC105371856 Gene

LOC105371856 (Uncharacterized LOC105371856) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371856 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371856 Gene

Genomics for LOC105371856 Gene

GeneHancer (GH) Regulatory Elements for LOC105371856 Gene

Promoters and enhancers for LOC105371856 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I063405 Enhancer 1.1 Ensembl ENCODE 0.4 +8.2 8242 2.3 HDGF PKNOX1 ARNT NEUROD1 SIN3A GATA2 ELK1 E2F8 ZNF207 ZNF143 FTSJ3 SMARCD2 TLK2 ENSG00000281311 DDX42 RPS10P26 ERN1 CYB561 LOC105371856 ENSG00000226797
GH17I063419 Enhancer 1.1 ENCODE dbSUPER 0.4 -5.5 -5483 1.6 HDAC1 TAF9B ARNT NFRKB SIN3A ZBTB40 TCF12 EGR1 CREM PHF21A PPIAP55 ACE CYB561 TACO1 LOC105371856 ENSG00000263644 GC17M063420 TANC2
GH17I063427 Enhancer 1 ENCODE dbSUPER 0.4 -13.3 -13319 0.8 ELF3 FOXA2 MLX ARID4B SIN3A RAD21 MIXL1 SP5 GATAD2B ELF1 CYB561 PPIAP55 ACE TACO1 ENSG00000263644 LOC105371856 GC17M063420
GH17I063425 Enhancer 0.8 ENCODE 0.4 -10.6 -10584 0.2 HDGF RB1 ARID4B SIN3A ZNF2 RAD21 RFX5 ARID2 SCRT2 ZNF143 CYB561 PPIAP55 ACE TACO1 DCAF7 ENSG00000263644 LOC105371856 GC17M063420 TANC2
GH17I063397 Enhancer 0.7 Ensembl ENCODE 0.4 +15.9 15882 3.2 POLR2A CREB1 MLLT1 RCOR1 BMI1 CHD2 TCAM1P ENSG00000271749 LOC105371856 ENSG00000226797 ENSG00000263644 TANC2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105371856 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371856 Gene

Genomic Locations for LOC105371856 Gene
chr17:63,380,158-63,415,011
(GRCh38/hg38)
Size:
34,854 bases
Orientation:
Minus strand

Genomic View for LOC105371856 Gene

Genes around LOC105371856 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371856 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371856 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371856 Gene

Proteins for LOC105371856 Gene

Post-translational modifications for LOC105371856 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371856 Gene

Domains & Families for LOC105371856 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371856 Gene

Function for LOC105371856 Gene

Phenotypes From GWAS Catalog for LOC105371856 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371856 Gene

Localization for LOC105371856 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371856 Gene

Pathways & Interactions for LOC105371856 Gene

SuperPathways for LOC105371856 Gene

No Data Available

Interacting Proteins for LOC105371856 Gene

Gene Ontology (GO) - Biological Process for LOC105371856 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371856 Gene

Drugs & Compounds for LOC105371856 Gene

No Compound Related Data Available

Transcripts for LOC105371856 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371856 Gene

No ASD Table

Relevant External Links for LOC105371856 Gene

GeneLoc Exon Structure for
LOC105371856

No data available for mRNA/cDNA for LOC105371856 Gene

Expression for LOC105371856 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371856 Gene

Orthologs for LOC105371856 Gene

No data available for Orthologs and Evolution for LOC105371856 Gene

Paralogs for LOC105371856 Gene

No data available for Paralogs for LOC105371856 Gene

Variants for LOC105371856 Gene

Sequence variations from dbSNP and Humsavar for LOC105371856 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000242171 -- 63,389,035(-) G/T intron_variant
rs1000291465 -- 63,397,049(-) T/G intron_variant
rs1000497473 -- 63,401,258(-) G/A intron_variant
rs1000513431 -- 63,388,121(-) G/A intron_variant
rs1000537576 -- 63,407,016(-) G/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371856 Gene

Disorders for LOC105371856 Gene

No disorders were found for LOC105371856 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371856 Gene

Publications for LOC105371856 Gene

No publications were found for LOC105371856 Gene.

Products for LOC105371856 Gene

Sources for LOC105371856 Gene

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