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Aliases for LOC105371855 Gene

Subcategory (RNA class) for LOC105371855 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105371855 Gene

  • Uncharacterized LOC105371855 3
  • AC005821.1 5

External Ids for LOC105371855 Gene

Previous GeneCards Identifiers for LOC105371855 Gene

  • GC17U902419

Summaries for LOC105371855 Gene

GeneCards Summary for LOC105371855 Gene

LOC105371855 (Uncharacterized LOC105371855) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371855 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371855 Gene

Genomics for LOC105371855 Gene

GeneHancer (GH) Regulatory Elements for LOC105371855 Gene

Promoters and enhancers for LOC105371855 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I062702 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 5.1 +5.6 5569 4 ARNT SIN3A ZNF2 ZBTB7B ZNF48 GLIS2 GATA2 ELK1 ZNF143 KLF7 MRC2 TLK2 MED13 RNU6-446P MIR633 LOC105371855 MARCH10 GC17M062741
GH17I062723 Enhancer 1.4 Ensembl ENCODE dbSUPER 5.3 +25.9 25907 2.7 PKNOX1 CLOCK NEUROD1 SIN3A FEZF1 ZBTB7B IRF4 E2F8 ZNF143 ATF7 MED13 TLK2 RPS10P26 MIR633 MARCH10 LOC105371855 MRC2 GC17M062741
GH17I062714 Enhancer 0.9 ENCODE dbSUPER 5.1 +15.6 15601 1.6 NCOA3 ESRRA ZKSCAN1 RFX5 FOSL1 GATA3 ZNF316 EGR1 FOS TRIM24 MED13 RPS10P26 MRC2 MARCH10 LOC105371855 GC17M062741
GH17I062734 Enhancer 0.7 dbSUPER 6.3 +35.9 35925 1.2 FOXA2 COPS2 FEZF1 BMI1 ZNF664 GATA3 ZNF366 ZNF547 PRDM10 FOSL2 LOC105371855 GC17M062741 MARCH10
GH17I062720 Enhancer 0.8 Ensembl ENCODE 5.4 +21.3 21301 0.3 SMARCA5 CTCF SRF CLOCK DDX20 GATAD2B ZNF384 RAD21 ZNF507 ZNF217 TLK2 MED13 MRC2 MARCH10 LOC105371855 GC17M062741
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105371855 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371855 Gene

Genomic Locations for LOC105371855 Gene
chr17:62,699,244-62,758,153
(GRCh38/hg38)
Size:
58,910 bases
Orientation:
Plus strand
chr17:60,776,605-60,815,283
(GRCh37/hg19)

Genomic View for LOC105371855 Gene

Genes around LOC105371855 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371855 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371855 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for LOC105371855 Gene

Proteins for LOC105371855 Gene

Post-translational modifications for LOC105371855 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371855 Gene

Domains & Families for LOC105371855 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371855 Gene

Function for LOC105371855 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371855 Gene

Localization for LOC105371855 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371855 Gene

Pathways & Interactions for LOC105371855 Gene

SuperPathways for LOC105371855 Gene

No Data Available

Interacting Proteins for LOC105371855 Gene

Gene Ontology (GO) - Biological Process for LOC105371855 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371855 Gene

Drugs & Compounds for LOC105371855 Gene

No Compound Related Data Available

Transcripts for LOC105371855 Gene

mRNA/cDNA for LOC105371855 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371855 Gene

No ASD Table

Relevant External Links for LOC105371855 Gene

GeneLoc Exon Structure for
LOC105371855

Expression for LOC105371855 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371855 Gene

Orthologs for LOC105371855 Gene

Evolution for LOC105371855 Gene

ENSEMBL:
Gene Tree for LOC105371855 (if available)
TreeFam:
Gene Tree for LOC105371855 (if available)

No data available for Orthologs for LOC105371855 Gene

Paralogs for LOC105371855 Gene

No data available for Paralogs for LOC105371855 Gene

Variants for LOC105371855 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371855 Gene

Disorders for LOC105371855 Gene

Additional Disease Information for LOC105371855

No disorders were found for LOC105371855 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105371855 Gene

Publications for LOC105371855 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for LOC105371855 Gene

Sources for LOC105371855 Gene

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