Aliases for LOC105371849 Gene
Subcategory (RNA class) for LOC105371849 Gene
ncRNA
Quality Score for this RNA gene is
13
Aliases for LOC105371849 Gene
External Ids for LOC105371849 Gene
- Entrez Gene: 105371849
- Ensembl: ENSG00000267416
Previous GeneCards Identifiers for LOC105371849 Gene
- GC17U902453
Summaries for LOC105371849 Gene
GeneCards Summary for LOC105371849 Gene
LOC105371849 (Uncharacterized LOC105371849) is an RNA Gene, and is affiliated with the ncRNA class.
Additional gene information for LOC105371849 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371849 Gene
Genomics for LOC105371849 Gene
GeneHancer (GH) Regulatory Elements for LOC105371849 Gene
Promoters and enhancers for LOC105371849 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH17J060077 | Promoter/Enhancer | 2 | EPDnew Ensembl ENCODE | 600.7 | +1.3 | 1263 | 6.9 | ELF3 ZFX NKRF POLR2A MLLT1 GTF2F1 ZNF384 AHR MAFK TFE3 | HEATR6 LOC105371849 TUBD1 APPBP2 PPM1D DHX40 RPS6KB1 WFDC21P | |
| GH17J060089 | Promoter/Enhancer | 1.7 | FANTOM5 Ensembl ENCODE dbSUPER | 0.4 | +12.1 | 12085 | 4.2 | TRIM24 IKZF1 PKNOX1 IKZF2 ZNF561 SOX6 DPF2 EED MTA3 RUNX3 | WFDC21P HEATR6 ENSG00000275860 APPBP2 RNFT1 LOC105371849 | |
| GH17J060086 | Promoter/Enhancer | 1.6 | Ensembl ENCODE dbSUPER | 0.4 | +8.4 | 8418 | 2.5 | ZNF121 SP7 ZNF548 PRDM1 MZF1 ZBTB8A ZNF600 PRDM10 ZIC2 ZEB2 | HEATR6 TUBD1 RPS6KB1 PPM1D DHX40 WFDC21P LOC105371849 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC105371849 on UCSC Golden Path with GeneCards custom track
Genomic Locations for LOC105371849 Gene
Genomic Locations for LOC105371849 Gene
- chr17:60,079,309-60,088,695
- (GRCh38/hg38)
- Size:
- 9,387 bases
- Orientation:
- Plus strand
- chr17:58,156,670-58,166,056
- (GRCh37/hg19)
- Size:
- 9,387 bases
- Orientation:
- Plus strand
Genomic View for LOC105371849 Gene
Genes around LOC105371849 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 17q23.1 by Entrez Gene
- 17q23.1 by Ensembl
LOC105371849 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC105371849 Gene
Proteins for LOC105371849 Gene
Post-translational modifications for LOC105371849 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105371849
- Origene Custom Protein Services for LOC105371849
No data available for DME Specific Peptides for LOC105371849 Gene
Domains & Families for LOC105371849 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371849 Gene
Function for LOC105371849 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for LOC105371849
-
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371849 Gene
Localization for LOC105371849 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371849 Gene
Transcripts for LOC105371849 Gene
mRNA/cDNA for LOC105371849 Gene
- (1) Additional mRNA sequences :
- (1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000589740 699 bps (ENST00000589740.1)
- (2) RNA Central transcripts :
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LOC105371849 Gene
- GeneLoc Exon Structure for
- LOC105371849
Expression for LOC105371849 Gene
No Expression Related Data Available
Primer Products
Gene Expression Assay Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371849 Gene
Orthologs for LOC105371849 Gene
No data available for Orthologs for LOC105371849 Gene
Paralogs for LOC105371849 Gene
No data available for Paralogs for LOC105371849 Gene
Variants for LOC105371849 Gene
| SNP ID | Clin | Chr 17 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000217651 | -- | 60,081,628(+) | C/G/T | intron_variant | |
| rs1000767040 | -- | 60,088,079(+) | C/G | intron_variant | |
| rs1001549927 | -- | 60,080,666(+) | A/G | intron_variant | |
| rs1001618989 | -- | 60,084,325(+) | C/T | intron_variant | |
| rs1001890377 | -- | 60,079,819(+) | A/C/G | intron_variant |
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371849 Gene
Disorders for LOC105371849 Gene
No disorders were found for LOC105371849 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371849 Gene
Publications for LOC105371849 Gene
No publications were found for LOC105371849 Gene.
No data available for External Links for LOC105371849 Gene
Products for LOC105371849 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105371849
- Origene Custom Protein Services for LOC105371849
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- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LOC105371849
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LOC105371849
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
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- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Cyagen custom Knockout/knockin (KOKI) mouse models for LOC105371849
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LOC105371849
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LOC105371849
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- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LOC105371849
Sources for LOC105371849 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) UniGene
- (28) AceView
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) HGMD
- (45) GAD
- (46) BGMUT
- (47) HuGE
- (48) Atlas
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) OCA
- (69) Proteopedia
- (70) MOPED
- (71) neXtProt
- (72) Reactome
- (73) GeneGo (Thomson Reuters)
- (74) fRNAdb
- (75) DISEASES
- (76) SIMAP
- (77) GenomeRNAi
- (78) LifeMap
- (79) miRTarBase
- (80) MalaCards
- (81) Invitrogen
- (82) BitterDB
- (83) ESI-BIO
- (84) RefSeq
- (85) BioSystems
- (86) MaxQB
- (87) IUPHAR
- (88) BioGPS
- (89) Illumina
- (90) COMPARTMENTS
- (91) HOMER
- (92) PaxDb
- (93) ApexBio
- (94) Addgene
- (95) antibodies-online
- (96) CYP
- (97) NONCODE
- (98) SwitchGear Genomics
- (99) TreeFam
- (100) PathCards
- (101) GeneReviews
- (102) GeneTex
- (103) Taconic Biosciences
- (104) GTEx
- (105) ProteomicsDB
- (106) SCBT
- (107) DGIdb
- (108) ClinicalTrials
- (109) FDA Approved Drugs
- (110) RVIS
- (111) SIGNOR
- (112) diseasecard
- (113) NIH Rare Diseases
- (114) Orphanet
- (115) UMLS
- (116) GTR
- (117) Disease Ontology
- (118) Genetics Home Reference
- (119) MeSH
- (120) MedlinePlus
- (121) CDC
- (122) NINDS
- (123) NCBI Bookshelf
- (124) ClinVar
- (125) Gene Damage Index
- (126) ViGene Biosciences
- (127) HPO
- (128) UDN
- (129) VISTA
- (130) FANTOM5
- (131) ENCODE
- (132) ProSci
- (133) Horizon
- (134) NURSA
- (135) IID
- (136) Cyagen
- (137) VectorBuilder
- (138) SNPedia
- (139) BRCA Exchange
- (140) St John's Lab
- (141) CIViC
- (142) ProteoGenix
- (143) dbSUPER
- (144) TISSUES
- (145) Gene ORGANizer
- (146) abm
- (147) CrownBio
- (148) Human Protein Atlas
- (149) GWAS Catalog
- (150) Monarch Initiative
- (151) DataMed
- (152) HumanCyc
- (153) genomics-online
- (154) UCNEbase
- (155) EPDnew
- (156) Applied Biosystems
- (157) GlyConnect
- (158) Aminode
- (159) GeneCopoeia
- (160) GPS-Prot
- (161) RNACentral
- (162) LncRNADisease
- (163) LOVD
- (164) miR2Disease
- (165) DiseaseEnhancer
- (166) Boster Bio
- (167) Biorbyt
- (168) Biocompare
- (169) Mastermind