Aliases for LOC105371847 Gene
Subcategory (RNA class) for LOC105371847 Gene
ncRNA
Quality Score for this RNA gene is
13
Aliases for LOC105371847 Gene
- Uncharacterized LOC105371847 3
External Ids for LOC105371847 Gene
- Entrez Gene: 105371847
Previous GeneCards Identifiers for LOC105371847 Gene
- GC17U902213
Summaries for LOC105371847 Gene
GeneCards Summary for LOC105371847 Gene
LOC105371847 (Uncharacterized LOC105371847) is an RNA Gene, and is affiliated with the ncRNA class.
Additional gene information for LOC105371847 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371847 Gene
Genomics for LOC105371847 Gene
GeneHancer (GH) Regulatory Elements for LOC105371847 Gene
Promoters and enhancers for LOC105371847 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH17J059533 | Enhancer | 0.7 | Ensembl | 0.7 | +3.9 | 3934 | 2.4 | NCOA3 SMARCA4 ARID3A IKZF1 GATAD2B CTCF ETV6 NR2C1 SMARCA5 ZKSCAN1 | GC17P059534 DHX40 YPEL2 RNU4-13P LOC105371847 GC17M059539 | |
| GH17J059538 | Enhancer | 0.8 | Ensembl | 0.4 | +8.7 | 8734 | 0.8 | MTA3 CC2D1A NFIB NCOA3 ZNF680 HDGF MTA1 CEBPG ARID3A IKZF1 | RNU4-13P GC17M059539 HEATR6 TUBD1 RPS6KB1 NDUFB8P2 APPBP2 LOC105371847 DHX40 | |
| GH17J059546 | Enhancer | 0.9 | Ensembl | 0.4 | +17.3 | 17331 | 1.2 | ZSCAN21 SP7 SMARCA4 ZNF547 POLR2A DPF2 ZNF600 PRDM10 ZEB2 ZNF639 | TUBD1 HEATR6 NDUFB8P2 SMG8 DHX40 RPS6KB1 YPEL2 GC17M059539 RNU4-13P LOC105371847 | |
| GH17J059542 | Enhancer | 0.5 | Ensembl | 0.4 | +13.8 | 13834 | 2.2 | ZNF24 FOXK2 MLLT1 SMARCE1 | DHX40 YPEL2 SMG8 RNU4-13P GC17M059539 LOC105371847 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC105371847 on UCSC Golden Path with GeneCards custom track
Genomic Locations for LOC105371847 Gene
Genomic Locations for LOC105371847 Gene
- chr17:59,529,867-59,550,534
- (GRCh38/hg38)
- Size:
- 20,668 bases
- Orientation:
- Plus strand
Genomic View for LOC105371847 Gene
Genes around LOC105371847 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 17q23.1 by Entrez Gene
LOC105371847 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC105371847 Gene
Proteins for LOC105371847 Gene
Post-translational modifications for LOC105371847 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105371847
- Origene Custom Protein Services for LOC105371847
No data available for DME Specific Peptides for LOC105371847 Gene
Domains & Families for LOC105371847 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371847 Gene
Function for LOC105371847 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for LOC105371847
-
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371847 Gene
Localization for LOC105371847 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371847 Gene
Transcripts for LOC105371847 Gene
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LOC105371847 Gene
- GeneLoc Exon Structure for
- LOC105371847
No data available for mRNA/cDNA for LOC105371847 Gene
Expression for LOC105371847 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371847 Gene
Orthologs for LOC105371847 Gene
No data available for Orthologs and Evolution for LOC105371847 Gene
Paralogs for LOC105371847 Gene
No data available for Paralogs for LOC105371847 Gene
Variants for LOC105371847 Gene
| SNP ID | Clin | Chr 17 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000049852 | -- | 59,543,720(+) | C/T | intron_variant | |
| rs1000502390 | -- | 59,537,353(+) | G/A/T | intron_variant | |
| rs1000603560 | -- | 59,550,917(+) | C/T | downstream_transcript_variant | |
| rs1000899222 | -- | 59,532,317(+) | C/T | intron_variant | |
| rs1000908778 | -- | 59,532,151(+) | T/C | intron_variant |
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371847 Gene
Disorders for LOC105371847 Gene
No disorders were found for LOC105371847 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371847 Gene
Publications for LOC105371847 Gene
No publications were found for LOC105371847 Gene.
No data available for External Links for LOC105371847 Gene
Products for LOC105371847 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105371847
- Origene Custom Protein Services for LOC105371847
- Browse OriGene Inhibitory RNA Products For LOC105371847
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LOC105371847
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LOC105371847
- Browse Sino Biological cDNA Clones
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- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Cyagen custom Knockout/knockin (KOKI) mouse models for LOC105371847
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LOC105371847
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LOC105371847
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LOC105371847
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LOC105371847
Sources for LOC105371847 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) UniGene
- (28) AceView
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) HGMD
- (45) GAD
- (46) BGMUT
- (47) HuGE
- (48) Atlas
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) OCA
- (69) Proteopedia
- (70) MOPED
- (71) neXtProt
- (72) Reactome
- (73) GeneGo (Thomson Reuters)
- (74) fRNAdb
- (75) DISEASES
- (76) SIMAP
- (77) GenomeRNAi
- (78) LifeMap
- (79) miRTarBase
- (80) MalaCards
- (81) Invitrogen
- (82) BitterDB
- (83) ESI-BIO
- (84) RefSeq
- (85) BioSystems
- (86) MaxQB
- (87) IUPHAR
- (88) BioGPS
- (89) Illumina
- (90) COMPARTMENTS
- (91) HOMER
- (92) PaxDb
- (93) ApexBio
- (94) Addgene
- (95) antibodies-online
- (96) CYP
- (97) NONCODE
- (98) SwitchGear Genomics
- (99) TreeFam
- (100) PathCards
- (101) GeneReviews
- (102) GeneTex
- (103) Taconic Biosciences
- (104) GTEx
- (105) ProteomicsDB
- (106) SCBT
- (107) DGIdb
- (108) ClinicalTrials
- (109) FDA Approved Drugs
- (110) RVIS
- (111) SIGNOR
- (112) diseasecard
- (113) NIH Rare Diseases
- (114) Orphanet
- (115) UMLS
- (116) GTR
- (117) Disease Ontology
- (118) Genetics Home Reference
- (119) MeSH
- (120) MedlinePlus
- (121) CDC
- (122) NINDS
- (123) NCBI Bookshelf
- (124) ClinVar
- (125) Gene Damage Index
- (126) ViGene Biosciences
- (127) HPO
- (128) UDN
- (129) VISTA
- (130) FANTOM5
- (131) ENCODE
- (132) ProSci
- (133) Horizon
- (134) NURSA
- (135) IID
- (136) Cyagen
- (137) VectorBuilder
- (138) SNPedia
- (139) BRCA Exchange
- (140) St John's Lab
- (141) CIViC
- (142) ProteoGenix
- (143) dbSUPER
- (144) TISSUES
- (145) Gene ORGANizer
- (146) abm
- (147) CrownBio
- (148) Human Protein Atlas
- (149) GWAS Catalog
- (150) Monarch Initiative
- (151) DataMed
- (152) HumanCyc
- (153) genomics-online
- (154) UCNEbase
- (155) EPDnew
- (156) Applied Biosystems
- (157) GlyConnect
- (158) Aminode
- (159) GeneCopoeia
- (160) GPS-Prot
- (161) RNACentral
- (162) LncRNADisease
- (163) LOVD
- (164) miR2Disease
- (165) DiseaseEnhancer
- (166) Boster Bio
- (167) Biorbyt
- (168) Biocompare
- (169) Mastermind