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Aliases for LOC105371845 Gene

Subcategory (RNA class) for LOC105371845 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371845 Gene

  • Uncharacterized LOC105371845 3

External Ids for LOC105371845 Gene

Previous GeneCards Identifiers for LOC105371845 Gene

  • GC17U902448

Summaries for LOC105371845 Gene

GeneCards Summary for LOC105371845 Gene

LOC105371845 (Uncharacterized LOC105371845) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371845 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371845 Gene

Genomics for LOC105371845 Gene

GeneHancer (GH) Regulatory Elements for LOC105371845 Gene

Promoters and enhancers for LOC105371845 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J059498 Enhancer 0.6 Ensembl ENCODE 600.7 -1.3 -1318 0.9 POLR2A HLF LOC105371845 SMG8 GC17P059484 LINC01476
GH17J059506 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.4 +7.4 7409 3.2 CEBPG MAFK TRIM24 ZNF639 CAVIN1 SOX13 ZNF316 ZNF766 E2F5 MAFG YPEL2 SMG8 DHX40 RNFT1-DT RNFT1 LOC105371845 LINC01476
GH17J059513 Enhancer 1.1 Ensembl ENCODE 0.4 +14.4 14409 5.2 ZNF652 ELF3 MNT CEBPG NFIB ZSCAN21 MAFK TFE3 SP7 SP1 DHX40 YPEL2 SMG8 ENSG00000275860 RNFT1-DT LINC01476 LOC105371845
GH17J059492 Enhancer 0.8 Ensembl ENCODE 0.4 -8.2 -8236 1 MTA3 ZNF121 PRDM1 CTBP1 PKNOX1 ZNF217 NONO ELF1 GATA3 MTA2 NDUFB8P2 RPS6KB1 TUBD1 SMG8 HEATR6 GC17P059484 LOC105371845 LINC01476
GH17J059521 Enhancer 0.9 ENCODE 0.3 +21.3 21264 1.2 CC2D1A CTCF CBFA2T2 CEBPG ZNF24 SP1 PPARG ZNF384 RAD21 RXRA ENSG00000224738 DHX40 RPS6KB1 NDUFB8P2 YPEL2 TUBD1 PTRH2 VMP1 LINC01476 LOC105371845
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371845 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371845 Gene

Genomic Locations for LOC105371845 Gene
chr17:59,500,392-59,506,857
(GRCh38/hg38)
Size:
6,466 bases
Orientation:
Plus strand

Genomic View for LOC105371845 Gene

Genes around LOC105371845 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371845 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371845 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371845 Gene

Proteins for LOC105371845 Gene

Post-translational modifications for LOC105371845 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371845 Gene

Domains & Families for LOC105371845 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371845 Gene

Function for LOC105371845 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371845 Gene

Localization for LOC105371845 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371845 Gene

Pathways & Interactions for LOC105371845 Gene

PathCards logo

SuperPathways for LOC105371845 Gene

No Data Available

Interacting Proteins for LOC105371845 Gene

Gene Ontology (GO) - Biological Process for LOC105371845 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371845 Gene

Drugs & Compounds for LOC105371845 Gene

No Compound Related Data Available

Transcripts for LOC105371845 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371845 Gene

No ASD Table

Relevant External Links for LOC105371845 Gene

GeneLoc Exon Structure for
LOC105371845

No data available for mRNA/cDNA for LOC105371845 Gene

Expression for LOC105371845 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371845 Gene

Orthologs for LOC105371845 Gene

No data available for Orthologs and Evolution for LOC105371845 Gene

Paralogs for LOC105371845 Gene

No data available for Paralogs for LOC105371845 Gene

Variants for LOC105371845 Gene

Sequence variations from dbSNP and Humsavar for LOC105371845 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000480642 -- 59,505,359(+) A/T intron_variant
rs1000589711 -- 59,504,871(+) T/G intron_variant
rs1001087192 -- 59,498,497(+) A/G upstream_transcript_variant
rs1001145566 -- 59,501,773(+) C/T intron_variant
rs1001260210 -- 59,501,367(+) CCCC/CCC intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371845 Gene

Disorders for LOC105371845 Gene

No disorders were found for LOC105371845 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371845 Gene

Publications for LOC105371845 Gene

No publications were found for LOC105371845 Gene.

No data available for External Links for LOC105371845 Gene

Products for LOC105371845 Gene

Sources for LOC105371845 Gene

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