Aliases for LOC105371842 Gene

Subcategory (RNA class) for LOC105371842 Gene

ncRNA

Aliases for LOC105371842 Gene

  • Uncharacterized LOC105371842 3

External Ids for LOC105371842 Gene

Previous GeneCards Identifiers for LOC105371842 Gene

  • GC17U902154

Summaries for LOC105371842 Gene

GeneCards Summary for LOC105371842 Gene

LOC105371842 (Uncharacterized LOC105371842) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371842 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371842 Gene

Genomics for LOC105371842 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105371842 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J058630 Promoter/Enhancer 2.1 Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 -0.9 -916 2.6 ARHGAP35 SP1 GATAD2A HNRNPL ATF7 PRDM10 REST ZNF629 TFE3 ZNF512 ENSG00000212195 LOC105371842 SRSF1 MKS1 DHX40 TRIM37 RAD51C SMG8 VEZF1 SKA2
GH17J058659 Promoter/Enhancer 2.4 EPDnew FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.3 +26.4 26352 1.7 ZNF221 ARHGAP35 SP1 GATAD2A HNRNPL ATF7 PRDM10 ZNF629 REST TFE3 MN297492 RF00003-036 TEX14 SRSF1 MKS1 SMG8 DHX40 TRIM37 RAD51C VEZF1
GH17J058642 Enhancer 0.7 Ensembl ENCODE 0.4 +9.9 9904 2.2 JUND FOS ATF3 JUN ZNF664 IKZF1 BCL6B ZNF121 TRIM37 TEX14 LOC105371842 MN297492 ENSG00000266826 SEPTIN4
GH17J058640 Enhancer 0.5 ENCODE 0.4 +7.7 7678 0.2 FOXA2 JUND ESR1 HNF4A RXRA SP1 LOC105371842 MN297492 ENSG00000266826 TEX14 SEPTIN4
GH17J058658 Enhancer 0.6 ENCODE 0.3 +25.3 25338 0.2 ZNF692 ZNF316 ZSCAN5C SCRT1 MAFG ZNF184 ZFP69B HDAC2 KDM1A EMSY MN297492 RF00003-036 LOC105371842 ENSG00000266826 TEX14 SEPTIN4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371842 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105371842 Gene

Genomic Locations for LOC105371842 Gene
chr17:58,632,797-58,651,594
(GRCh38/hg38)
Size:
18,798 bases
Orientation:
Plus strand

Genomic View for LOC105371842 Gene

Genes around LOC105371842 on UCSC Golden Path with GeneCards custom track
LOC105371842 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105371842 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371842 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371842 Gene

Proteins for LOC105371842 Gene

Post-translational modifications for LOC105371842 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371842 Gene

Domains & Families for LOC105371842 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371842 Gene

Function for LOC105371842 Gene

Phenotypes From GWAS Catalog for LOC105371842 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371842 Gene

Localization for LOC105371842 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371842 Gene

Pathways & Interactions for LOC105371842 Gene

PathCards logo

SuperPathways for LOC105371842 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105371842 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105371842 Gene

Drugs & Compounds for LOC105371842 Gene

No Compound Related Data Available

Transcripts for LOC105371842 Gene

LOC105371842 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371842 Gene

No ASD Table

Relevant External Links for LOC105371842 Gene

GeneLoc Exon Structure for
LOC105371842

No data available for mRNA/cDNA for LOC105371842 Gene

Expression for LOC105371842 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371842 Gene

Orthologs for LOC105371842 Gene

No data available for Orthologs and Evolution for LOC105371842 Gene

Paralogs for LOC105371842 Gene

No data available for Paralogs for LOC105371842 Gene

Variants for LOC105371842 Gene

Additional dbSNP identifiers (rs#s) for LOC105371842 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371842 Gene

Disorders for LOC105371842 Gene

No disorders were found for LOC105371842 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371842 Gene

Publications for LOC105371842 Gene

No publications were found for LOC105371842 Gene.

No data available for Mastermind for LOC105371842 Gene

Products for LOC105371842 Gene

Sources for LOC105371842 Gene