Aliases for LOC105371824 Gene

Data sources for LOC105371824 Gene:

RNA type for LOC105371824 Gene

lncRNA

Aliases for LOC105371824 Gene

External Ids for LOC105371824 Gene

Previous GeneCards Identifiers for LOC105371824 Gene

  • GC17U902349
  • GC17M050538

Summaries for LOC105371824 Gene

GeneCards Summary for LOC105371824 Gene

LOC105371824 (Uncharacterized LOC105371824) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105371824 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371824 Gene

Genomics for LOC105371824 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105371824 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371824 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105371824 Gene

Latest Assembly
chr17:50,525,520-50,538,761
(GRCh38/hg38)
Size:
13,242 bases
Orientation:
Minus strand

Previous Assembly
chr17:48,614,655-48,616,115
(GRCh37/hg19 by Entrez Gene)
Size:
1,461 bases
Orientation:
Minus strand

chr17:48,614,655-48,616,115
(GRCh37/hg19 by Ensembl)
Size:
1,461 bases
Orientation:
Minus strand

Genomic View for LOC105371824 Gene

Genes around LOC105371824 on UCSC Golden Path with GeneCards custom track
LOC105371824 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105371824 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371824 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371824 Gene

Proteins for LOC105371824 Gene

Post-translational modifications for LOC105371824 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371824 Gene

Domains & Families for LOC105371824 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371824 Gene

Function for LOC105371824 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371824 Gene

Localization for LOC105371824 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371824 Gene

Pathways & Interactions for LOC105371824 Gene

PathCards logo

SuperPathways for LOC105371824 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105371824 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105371824 Gene

Drugs & Compounds for LOC105371824 Gene

No Compound Related Data Available

Transcripts for LOC105371824 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC105371824 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00008B9A1B_9606 lncRNA 607 4

Ensembl: ENST00000513017 (view in UCSC) ,

LncBook: HSALNT0242405,

LNCipedia: lnc-CHAD-3:1,

NONCODE: NONHSAT054693.2,

URS0000EED82A_9606 lncRNA 1244 1

Ensembl: ENST00000654456 (view in UCSC) ,

URS0000A765AE_9606 lncRNA 607 1

RefSeq: NR_135675,

URS00008B3016_9606 lncRNA 719 3

LncBook: HSALNT0242407,

LNCipedia: lnc-CHAD-3:2,

NONCODE: NONHSAT054694.2,

URS00009B9717_9606 lncRNA 886 2

LncBook: HSALNT0242406,

NONCODE: NONHSAT176345.1,

LOC105371824 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC105371824 Gene

1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371824 Gene

No ASD Table

Relevant External Links for LOC105371824 Gene

GeneLoc Exon Structure for
LOC105371824

Expression for LOC105371824 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371824 Gene

Orthologs for LOC105371824 Gene

Evolution for LOC105371824 Gene

ENSEMBL:
Gene Tree for LOC105371824 (if available)
TreeFam:
Gene Tree for LOC105371824 (if available)

No data available for Orthologs for LOC105371824 Gene

Paralogs for LOC105371824 Gene

No data available for Paralogs for LOC105371824 Gene

Variants for LOC105371824 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105371824 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371824 Gene

Disorders for LOC105371824 Gene

No disorders were found for LOC105371824 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371824 Gene

Publications for LOC105371824 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3

No data available for Mastermind for LOC105371824 Gene

Products for LOC105371824 Gene

Sources for LOC105371824 Gene