Aliases for LOC105371795 Gene

Subcategory (RNA class) for LOC105371795 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371795 Gene

  • Uncharacterized LOC105371795 3
  • NONHSAG021968 94
  • Lnc-PLCD3-3 170

External Ids for LOC105371795 Gene

Previous GeneCards Identifiers for LOC105371795 Gene

  • GC17U902269

Summaries for LOC105371795 Gene

GeneCards Summary for LOC105371795 Gene

LOC105371795 (Uncharacterized LOC105371795) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105371795 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371795 Gene

Genomics for LOC105371795 Gene

GeneHancer (GH) Regulatory Elements for LOC105371795 Gene

Promoters and enhancers for LOC105371795 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J045168 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 750.6 +0.9 908 5.8 LCORL MLX RBPJ POLR2A NR2F1 NR2F6 CREB1 MIXL1 NFYC ZNF652 ENSG00000267288 LOC105371795 ENSG00000262372 DCAKD ENSG00000224505 EFTUD2 LINC02210 UBTF GPATCH8 HEXIM1
GH17J045174 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.6 -3.4 -3373 2.1 ZBTB6 POLR2A TCF7L2 NR2F6 ZNF362 MYC HLF MAX ZNF384 CEBPG ENSG00000266918 ENSG00000233483 LOC105371795 piR-60140-007
GH17J045177 Enhancer 0.3 dbSUPER 0.4 -5.3 -5290 1.1 ZNF335 DCAKD HEXIM1 piR-60140-007 LOC105371795
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371795 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371795 Gene

Genomic Locations for LOC105371795 Gene
chr17:45,168,800-45,172,643
(GRCh38/hg38)
Size:
3,844 bases
Orientation:
Minus strand

Genomic View for LOC105371795 Gene

Genes around LOC105371795 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371795 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371795 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371795 Gene

Proteins for LOC105371795 Gene

Post-translational modifications for LOC105371795 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371795 Gene

Domains & Families for LOC105371795 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371795 Gene

Function for LOC105371795 Gene

Phenotypes From GWAS Catalog for LOC105371795 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371795 Gene

Localization for LOC105371795 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371795 Gene

Pathways & Interactions for LOC105371795 Gene

PathCards logo

SuperPathways for LOC105371795 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105371795 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371795 Gene

Drugs & Compounds for LOC105371795 Gene

No Compound Related Data Available

Transcripts for LOC105371795 Gene

mRNA/cDNA for LOC105371795 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(1) RNACentral transcripts :
(1) NONCODE transcripts :
(1) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371795 Gene

No ASD Table

Relevant External Links for LOC105371795 Gene

GeneLoc Exon Structure for
LOC105371795

Expression for LOC105371795 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371795 Gene

Orthologs for LOC105371795 Gene

No data available for Orthologs and Evolution for LOC105371795 Gene

Paralogs for LOC105371795 Gene

No data available for Paralogs for LOC105371795 Gene

Variants for LOC105371795 Gene

Sequence variations from dbSNP and Humsavar for LOC105371795 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000139585 -- 45,171,151(-) A/G non_coding_transcript_variant
rs1000324729 -- 45,172,301(-) C/T upstream_transcript_variant
rs1001052146 -- 45,172,780(-) A/G upstream_transcript_variant
rs1001144960 -- 45,172,447(-) A/G upstream_transcript_variant
rs1001167216 -- 45,171,021(-) C/G non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371795 Gene

Disorders for LOC105371795 Gene

No disorders were found for LOC105371795 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371795 Gene

Publications for LOC105371795 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 56
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 56

No data available for External Links for LOC105371795 Gene

Products for LOC105371795 Gene

Sources for LOC105371795 Gene