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Aliases for LOC105371781 Gene

Subcategory (RNA class) for LOC105371781 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371781 Gene

  • Uncharacterized LOC105371781 3

External Ids for LOC105371781 Gene

Previous GeneCards Identifiers for LOC105371781 Gene

  • GC17U902281

Summaries for LOC105371781 Gene

GeneCards Summary for LOC105371781 Gene

LOC105371781 (Uncharacterized LOC105371781) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371781 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371781 Gene

Genomics for LOC105371781 Gene

GeneHancer (GH) Regulatory Elements for LOC105371781 Gene

Promoters and enhancers for LOC105371781 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J042152 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 600.7 +1.2 1190 3.6 SP1 ELF3 ZFX SIX5 ZNF148 NKRF POLR2A MLLT1 ZNF121 CEBPG ENSG00000267261 LOC105371781 RAB5C ENSG00000267658 PLEKHH3 KLHL10 KLHL11 DHX58 KAT2A CNTD1
GH17J042128 Promoter/Enhancer 1.9 Ensembl ENCODE dbSUPER 0.3 -20.5 -20453 8.4 ZNF652 ELF3 CEBPG ZSCAN21 MAFK TFE3 SP7 ELF1 SP1 PPARG GC17P042132 DHX58 CNP HSPB9 CNTD1 NBR2 RETREG3 RAB5C KCNH4 HCRT
GH17J042141 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -10.9 -10904 2.6 PRDM10 GATAD2A RXRB RCOR2 ZNF341 RFX1 ZNF205 FOXA1 FOXA2 FOS DHX58 HSPB9 RAB5C ENSG00000267261 LOC105371781 GC17P042132
GH17J042144 Enhancer 0.4 Ensembl 0.4 -8.4 -8351 0.3 ZNF384 ZNF169 ZNF362 HSD17B1 HSD17B1P1 RAB5C LOC105371781 ENSG00000267261 GC17P042132
GH17J042138 Enhancer 0.4 ENCODE dbSUPER 0.4 -14.6 -14630 1.2 DHX58 IFI35 GC17P042132 LOC105371781 RAB5C ENSG00000267261
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371781 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371781 Gene

Genomic Locations for LOC105371781 Gene
chr17:42,153,414-42,157,639
(GRCh38/hg38)
Size:
4,226 bases
Orientation:
Plus strand

Genomic View for LOC105371781 Gene

Genes around LOC105371781 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371781 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371781 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371781 Gene

Proteins for LOC105371781 Gene

Post-translational modifications for LOC105371781 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371781 Gene

Domains & Families for LOC105371781 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371781 Gene

Function for LOC105371781 Gene

Phenotypes From GWAS Catalog for LOC105371781 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371781 Gene

Localization for LOC105371781 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371781 Gene

Pathways & Interactions for LOC105371781 Gene

PathCards logo

SuperPathways for LOC105371781 Gene

No Data Available

Interacting Proteins for LOC105371781 Gene

Gene Ontology (GO) - Biological Process for LOC105371781 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371781 Gene

Drugs & Compounds for LOC105371781 Gene

No Compound Related Data Available

Transcripts for LOC105371781 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371781 Gene

No ASD Table

Relevant External Links for LOC105371781 Gene

GeneLoc Exon Structure for
LOC105371781

No data available for mRNA/cDNA for LOC105371781 Gene

Expression for LOC105371781 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371781 Gene

Orthologs for LOC105371781 Gene

No data available for Orthologs and Evolution for LOC105371781 Gene

Paralogs for LOC105371781 Gene

No data available for Paralogs for LOC105371781 Gene

Variants for LOC105371781 Gene

Sequence variations from dbSNP and Humsavar for LOC105371781 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000343677 -- 42,154,684(+) G/T non_coding_transcript_variant
rs1000676693 -- 42,153,541(+) T/A upstream_transcript_variant
rs1000874582 -- 42,153,273(+) G/A upstream_transcript_variant
rs1000935453 -- 42,156,275(+) A/C non_coding_transcript_variant
rs1001349930 -- 42,155,697(+) C/A/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371781 Gene

Disorders for LOC105371781 Gene

No disorders were found for LOC105371781 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371781 Gene

Publications for LOC105371781 Gene

No publications were found for LOC105371781 Gene.

No data available for External Links for LOC105371781 Gene

Products for LOC105371781 Gene

Sources for LOC105371781 Gene

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