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Aliases for LOC105371768 Gene

Subcategory (RNA class) for LOC105371768 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371768 Gene

  • Uncharacterized LOC105371768 3

External Ids for LOC105371768 Gene

Previous GeneCards Identifiers for LOC105371768 Gene

  • GC17U902447

Summaries for LOC105371768 Gene

GeneCards Summary for LOC105371768 Gene

LOC105371768 (Uncharacterized LOC105371768) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371768 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371768 Gene

Genomics for LOC105371768 Gene

GeneHancer (GH) Regulatory Elements for LOC105371768 Gene

Promoters and enhancers for LOC105371768 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J039174 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 600.7 -0.9 -873 1.6 CTCF ZNF148 RAD21 ZNF143 REST TRIM22 PATZ1 POLR2A ZNF766 ZNF157 LOC105371768 ENSG00000266101 CACNB1 RPL19 PSMB3 TBC1D3 ARL5C
GH17J039175 Enhancer 0.7 ENCODE dbSUPER 600.7 +0.2 176 0.2 FOSL1 ZNF623 JUN KDM1A SMARCE1 DACH1 CBFA2T3 LOC105371768 CACNB1 RPL19 ENSG00000266101
GH17J039179 Enhancer 0.7 ENCODE dbSUPER 600.7 +1.7 1746 0.2 SP1 ZBTB33 POLR2A SP2 KLF1 LOC105371768 CACNB1 RPL19 ENSG00000266101
GH17J039191 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.3 +21.2 21231 11.7 HDGF ZNF652 SP1 ZFX CTCF MNT SIX5 CBFA2T2 ZNF148 NKRF RPL19 CACNB1 CDK12 MED1 RPL23 SNORA21 LOC105371762 ENSG00000263466 STAC2 LOC105371768
GH17J039173 Promoter/Enhancer 1.1 Ensembl ENCODE dbSUPER 0.7 -2.3 -2266 1 ZNF600 HIC1 POLR2A ENSG00000266101 CACNB1 RPL19 PSMB3 ARL5C LOC105371763 LOC105371768
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371768 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371768 Gene

Genomic Locations for LOC105371768 Gene
chr17:39,175,767-39,184,330
(GRCh38/hg38)
Size:
8,564 bases
Orientation:
Plus strand

Genomic View for LOC105371768 Gene

Genes around LOC105371768 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371768 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371768 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371768 Gene

Proteins for LOC105371768 Gene

Post-translational modifications for LOC105371768 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371768 Gene

Domains & Families for LOC105371768 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371768 Gene

Function for LOC105371768 Gene

Phenotypes From GWAS Catalog for LOC105371768 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371768 Gene

Localization for LOC105371768 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371768 Gene

Pathways & Interactions for LOC105371768 Gene

PathCards logo

SuperPathways for LOC105371768 Gene

No Data Available

Interacting Proteins for LOC105371768 Gene

Gene Ontology (GO) - Biological Process for LOC105371768 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371768 Gene

Drugs & Compounds for LOC105371768 Gene

No Compound Related Data Available

Transcripts for LOC105371768 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371768 Gene

No ASD Table

Relevant External Links for LOC105371768 Gene

GeneLoc Exon Structure for
LOC105371768

No data available for mRNA/cDNA for LOC105371768 Gene

Expression for LOC105371768 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371768 Gene

Orthologs for LOC105371768 Gene

No data available for Orthologs and Evolution for LOC105371768 Gene

Paralogs for LOC105371768 Gene

No data available for Paralogs for LOC105371768 Gene

Variants for LOC105371768 Gene

Sequence variations from dbSNP and Humsavar for LOC105371768 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs181552596 likely-benign, not specified 39,184,868(+) G/A/C/T downstream_transcript_variant
rs1000198737 -- 39,176,956(+) T/C/G intron_variant
rs1000349304 -- 39,181,003(+) C/A intron_variant
rs1000359003 -- 39,170,583(+) G/A genic_upstream_transcript_variant, intron_variant
rs1000390115 -- 39,170,257(+) C/A/T genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371768 Gene

Disorders for LOC105371768 Gene

No disorders were found for LOC105371768 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371768 Gene

Publications for LOC105371768 Gene

No publications were found for LOC105371768 Gene.

No data available for External Links for LOC105371768 Gene

Products for LOC105371768 Gene

Sources for LOC105371768 Gene

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