Aliases for LOC105371763 Gene

Subcategory (RNA class) for LOC105371763 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for LOC105371763 Gene

  • Uncharacterized LOC105371763 3
  • CTB-58E17.1 3
  • Lnc-MLLT6-3 165

External Ids for LOC105371763 Gene

Previous GeneCards Identifiers for LOC105371763 Gene

  • GC17U902432

Summaries for LOC105371763 Gene

GeneCards Summary for LOC105371763 Gene

LOC105371763 (Uncharacterized LOC105371763) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105371763 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371763 Gene

Genomics for LOC105371763 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105371763 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J038700 Enhancer 0.9 ENCODE dbSUPER 600.7 -1.7 -1681 0.2 IKZF1 RXRB NR2C1 IRF2 SP1 GABPA ZNF600 MGA MAFF ZBTB17 LOC105371763 ENSG00000275532 MLLT6 piR-57133-257 EPOP
GH17J039164 Promoter/Enhancer 1.7 Ensembl ENCODE CraniofacialAtlas dbSUPER 4.5 +465.0 464974 4.2 SP1 GATAD2A CTCF PRDM10 IKZF1 KDM1A FOS FOXA1 DDX20 PRDM1 ARL5C ENSG00000280177 LOC105371768 NONHSAG021690.2 lnc-ARL5C-1 MED1 MED24 SNORA21 CDK12 RPL23
GH17J039160 Enhancer 0.7 ENCODE dbSUPER 4.6 +460.3 460266 1.4 PRDM10 PKNOX1 CEBPA ZNF768 CEBPB POLR2A MAX ARL5C LOC105371763 ENSG00000280177 LOC105371768 PLXDC1 TRC-GCA2-4 piR-36245-005
GH17J039162 Enhancer 0.5 dbSUPER 5.2 +461.7 461715 0.7 ZNF512 NR2F1 NR2F6 ZNF366 ZNF121 LOC105371763 ARL5C ENSG00000280177 LOC105371768 PLXDC1 TRC-GCA2-4 piR-36245-005
GH17J039169 Enhancer 0.5 Ensembl dbSUPER 4.5 +469.0 468957 2.2 ZFHX2 EGR2 CACNB1 RPL19 PSMB3 ARL5C MRPL45 LRRC37A11P LOC105371763 ENSG00000266101 lnc-ARL5C-1 LOC105371768
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371763 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105371763 Gene

Genomic Locations for LOC105371763 Gene
chr17:38,701,144-38,704,744
(GRCh38/hg38)
Size:
3,601 bases
Orientation:
Plus strand

Genomic View for LOC105371763 Gene

Genes around LOC105371763 on UCSC Golden Path with GeneCards custom track
LOC105371763 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105371763 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371763 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371763 Gene

Proteins for LOC105371763 Gene

Post-translational modifications for LOC105371763 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371763 Gene

Domains & Families for LOC105371763 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371763 Gene

Function for LOC105371763 Gene

Phenotypes From GWAS Catalog for LOC105371763 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371763 Gene

Localization for LOC105371763 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371763 Gene

Pathways & Interactions for LOC105371763 Gene

PathCards logo

SuperPathways for LOC105371763 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105371763 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105371763 Gene

Drugs & Compounds for LOC105371763 Gene

No Compound Related Data Available

Transcripts for LOC105371763 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC105371763 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000D77F94_9606 lncRNA 2727 1

RefSeq: NR_158157,

URS00019F8138_9606 lncRNA 2212 1

ENA: MN297446.1:1..2213:ncRNA,

URS0000D57848_9606 lncRNA 1140 1

LNCipedia: lnc-MLLT6-3:1,

LOC105371763 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC105371763 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371763 Gene

No ASD Table

Relevant External Links for LOC105371763 Gene

GeneLoc Exon Structure for
LOC105371763

Expression for LOC105371763 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371763 Gene

Orthologs for LOC105371763 Gene

No data available for Orthologs and Evolution for LOC105371763 Gene

Paralogs for LOC105371763 Gene

No data available for Paralogs for LOC105371763 Gene

Variants for LOC105371763 Gene

Additional dbSNP identifiers (rs#s) for LOC105371763 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371763 Gene

Disorders for LOC105371763 Gene

No disorders were found for LOC105371763 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371763 Gene

Publications for LOC105371763 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3

No data available for Mastermind for LOC105371763 Gene

Products for LOC105371763 Gene

Sources for LOC105371763 Gene