Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105371763 Gene

Subcategory (RNA class) for LOC105371763 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371763 Gene

  • Uncharacterized LOC105371763 3
  • Uncharacterized Protein LOC105371763 3
  • CTB-58E17.1 3

External Ids for LOC105371763 Gene

Previous GeneCards Identifiers for LOC105371763 Gene

  • GC17U902432

Summaries for LOC105371763 Gene

GeneCards Summary for LOC105371763 Gene

LOC105371763 (Uncharacterized LOC105371763) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371763 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371763 Gene

Genomics for LOC105371763 Gene

GeneHancer (GH) Regulatory Elements for LOC105371763 Gene

Promoters and enhancers for LOC105371763 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J038700 Enhancer 1 ENCODE dbSUPER 600.7 -1.5 -1513 0.2 ELF3 MLLT1 SP1 PPARG RXRA IKZF1 ZNF600 RXRB GABPA NR2C1 LOC105371763 GC17M038684 LOC105371764
GH17J038867 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 12.3 +170.7 170673 9.3 ZNF652 ZFX ELF3 CC2D1A ZKSCAN8 MNT ZNF148 NKRF POLR2A MLLT1 LASP1 MED1 CDK12 LOC105371762 SNORA21 RPL23 CWC25 PSMB3 C17orf98 LOC105371763
GH17J038745 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 12.5 +48.9 48852 8.7 ZFX SP1 ELF3 ZKSCAN8 MNT CBFA2T2 ZNF148 NKRF POLR2A MLLT1 PCGF2 PSMB3 LOC100287808 PIR60227 ENSG00000277182 MED1 CDK12 LOC105371762 SNORA21 RPL23
GH17J039151 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 12.3 +452.2 452225 5.6 ZNF652 CC2D1A ELF3 CTCF MNT CBFA2T2 ZNF148 NKRF ZNF121 GTF2F1 TRC-GCA2-4 PLXDC1 TRC-GCA2-3 CDK12 MED1 LOC105371762 SNORD124 SNORA21 MED24 RPL23
GH17J038966 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 12.3 +266.6 266625 1.6 SP1 POLR2A RXRA ZNF143 ZNF24 ATF3 YY1 RAD21 EGR1 HSF1 FBXO47 LOC105371763 CDK12 LOC105371762 GC17P039017
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371763 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371763 Gene

Genomic Locations for LOC105371763 Gene
chr17:38,700,976-38,703,537
(GRCh38/hg38)
Size:
2,562 bases
Orientation:
Plus strand

Genomic View for LOC105371763 Gene

Genes around LOC105371763 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371763 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371763 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371763 Gene

Proteins for LOC105371763 Gene

Post-translational modifications for LOC105371763 Gene

No Post-translational modifications

Other Protein References for LOC105371763 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC105371763 Gene

Domains & Families for LOC105371763 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371763 Gene

Function for LOC105371763 Gene

Phenotypes From GWAS Catalog for LOC105371763 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371763 Gene

Localization for LOC105371763 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371763 Gene

Pathways & Interactions for LOC105371763 Gene

PathCards logo

SuperPathways for LOC105371763 Gene

No Data Available

Interacting Proteins for LOC105371763 Gene

Gene Ontology (GO) - Biological Process for LOC105371763 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371763 Gene

Drugs & Compounds for LOC105371763 Gene

No Compound Related Data Available

Transcripts for LOC105371763 Gene

mRNA/cDNA for LOC105371763 Gene

(1) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371763 Gene

No ASD Table

Relevant External Links for LOC105371763 Gene

GeneLoc Exon Structure for
LOC105371763

Expression for LOC105371763 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371763 Gene

Orthologs for LOC105371763 Gene

No data available for Orthologs and Evolution for LOC105371763 Gene

Paralogs for LOC105371763 Gene

No data available for Paralogs for LOC105371763 Gene

Variants for LOC105371763 Gene

Sequence variations from dbSNP and Humsavar for LOC105371763 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000002940 -- 38,703,962(+) A/T 3_prime_UTR_variant
rs1000192790 -- 38,703,913(+) C/G/T 3_prime_UTR_variant
rs1000325812 -- 38,693,155(+) C/A/T intron_variant
rs1000645287 -- 38,699,228(+) C/A/G intron_variant
rs1000748369 -- 38,705,205(+) G/A/C downstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371763 Gene

Disorders for LOC105371763 Gene

No disorders were found for LOC105371763 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371763 Gene

Publications for LOC105371763 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

No data available for External Links for LOC105371763 Gene

Products for LOC105371763 Gene

Sources for LOC105371763 Gene

Content
Loading form....