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Aliases for LOC105371762 Gene

Subcategory (RNA class) for LOC105371762 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371762 Gene

  • Uncharacterized LOC105371762 3
  • CTB-58E17.9 3

External Ids for LOC105371762 Gene

Previous GeneCards Identifiers for LOC105371762 Gene

  • GC17U902504

Summaries for LOC105371762 Gene

GeneCards Summary for LOC105371762 Gene

LOC105371762 (Uncharacterized LOC105371762) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371762 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371762 Gene

Genomics for LOC105371762 Gene

GeneHancer (GH) Regulatory Elements for LOC105371762 Gene

Promoters and enhancers for LOC105371762 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J038718 Promoter/Enhancer 1.3 Ensembl ENCODE 600.7 +1.0 974 2 ZNF652 SP1 MLLT1 SP5 ZNF600 ATF1 REST PKNOX1 PATZ1 ZNF692 LOC105371762 MIR4726 ENSG00000275665 PCGF2 PSMB3 GC17M038716 MLLT6 ENSG00000275532
GH17J038745 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 80.8 -29.5 -29463 8.7 ZFX SP1 ELF3 ZKSCAN8 MNT CBFA2T2 ZNF148 NKRF POLR2A MLLT1 PCGF2 PSMB3 ENSG00000277182 LOC100287808 PIR60227 MED1 CDK12 LOC105371762 SNORA21 RPL23
GH17J038867 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 49.6 -151.3 -151284 9.3 ZNF652 ZFX ELF3 CC2D1A ZKSCAN8 MNT ZNF148 NKRF POLR2A MLLT1 LASP1 MED1 CDK12 LOC105371762 SNORA21 RPL23 CWC25 PSMB3 C17orf98 LOC105371763
GH17J039151 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 44.6 -432.8 -432836 5.6 ZNF652 CC2D1A ELF3 CTCF MNT CBFA2T2 ZNF148 NKRF ZNF121 GTF2F1 TRC-GCA2-4 TRC-GCA2-3 PLXDC1 CDK12 MED1 LOC105371762 SNORD124 SNORA21 MED24 RPL23
GH17J038823 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 47 -104.6 -104573 3 HDGF SP1 CC2D1A ZFX ELF3 MNT SIX5 ZNF148 NKRF POLR2A CWC25 MIR4727 MED1 CDK12 SNORA21 LOC105371762 RPL23 PIP4K2B RPL19 STARD3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371762 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371762 Gene

Genomic Locations for LOC105371762 Gene
chr17:38,719,037-38,720,365
(GRCh38/hg38)
Size:
1,329 bases
Orientation:
Minus strand

Genomic View for LOC105371762 Gene

Genes around LOC105371762 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371762 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371762 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371762 Gene

Proteins for LOC105371762 Gene

Post-translational modifications for LOC105371762 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371762 Gene

Domains & Families for LOC105371762 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371762 Gene

Function for LOC105371762 Gene

Phenotypes From GWAS Catalog for LOC105371762 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371762 Gene

Localization for LOC105371762 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371762 Gene

Pathways & Interactions for LOC105371762 Gene

PathCards logo

SuperPathways for LOC105371762 Gene

No Data Available

Interacting Proteins for LOC105371762 Gene

Gene Ontology (GO) - Biological Process for LOC105371762 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371762 Gene

Drugs & Compounds for LOC105371762 Gene

No Compound Related Data Available

Transcripts for LOC105371762 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371762 Gene

No ASD Table

Relevant External Links for LOC105371762 Gene

GeneLoc Exon Structure for
LOC105371762

No data available for mRNA/cDNA for LOC105371762 Gene

Expression for LOC105371762 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371762 Gene

Orthologs for LOC105371762 Gene

No data available for Orthologs and Evolution for LOC105371762 Gene

Paralogs for LOC105371762 Gene

No data available for Paralogs for LOC105371762 Gene

Variants for LOC105371762 Gene

Sequence variations from dbSNP and Humsavar for LOC105371762 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000007336 -- 38,722,027(-) C/T upstream_transcript_variant
rs1000921595 -- 38,721,673(-) C/T upstream_transcript_variant
rs1004890639 -- 38,719,405(-) T/C intron_variant
rs1005774831 -- 38,719,392(-) T/C intron_variant
rs1005864754 -- 38,721,062(-) G/A/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371762 Gene

Disorders for LOC105371762 Gene

No disorders were found for LOC105371762 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371762 Gene

Publications for LOC105371762 Gene

No publications were found for LOC105371762 Gene.

No data available for External Links for LOC105371762 Gene

Products for LOC105371762 Gene

Sources for LOC105371762 Gene

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