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Aliases for LOC105371754 Gene

Subcategory (RNA class) for LOC105371754 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371754 Gene

  • Uncharacterized LOC105371754 3

External Ids for LOC105371754 Gene

Previous GeneCards Identifiers for LOC105371754 Gene

  • GC17U902197

Summaries for LOC105371754 Gene

GeneCards Summary for LOC105371754 Gene

LOC105371754 (Uncharacterized LOC105371754) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371754 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371754 Gene

Genomics for LOC105371754 Gene

GeneHancer (GH) Regulatory Elements for LOC105371754 Gene

Promoters and enhancers for LOC105371754 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J037707 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 600.7 +0.3 252 7.3 ELF3 CEBPG RERE CSDE1 MAFK TFE3 SP1 HNF1A PPARG SP5 LOC105371754 HNF1B MRPL45 HMGB1P24 ACACA
GH17J037740 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 +33.7 33682 6.9 SP1 MNT NKRF POLR2A RELA HNF1A CREM MLLT1 KAT8 IKZF1 HNF1B LOC105371762 DDX52 ACACA LOC105371754
GH17J037697 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -12.1 -12141 1.2 ELF3 RERE ZNF24 PPARG ZNF644 KAT8 HMG20B SOX13 CEBPA GATAD2A HNF1B MRPL45 LOC105371754 GC17P037657
GH17J037716 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +6.8 6772 2.7 ELF3 CEBPG RERE TFE3 TRIM24 ELF1 SP1 HNF1A PPARG PRDM1 HNF1B HMGB1P24 LOC105371754
GH17J037702 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -7.9 -7930 1.1 ZNF692 JUN SP1 ZBTB20 JUND RAD21 SMC3 ZFP69B FOSL2 SIN3A HNF1B DDX52 LOC105371754 GC17P037657
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371754 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371754 Gene

Genomic Locations for LOC105371754 Gene
chr17:37,710,671-37,724,862
(GRCh38/hg38)
Size:
14,192 bases
Orientation:
Plus strand

Genomic View for LOC105371754 Gene

Genes around LOC105371754 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371754 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371754 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371754 Gene

Proteins for LOC105371754 Gene

Post-translational modifications for LOC105371754 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371754 Gene

Domains & Families for LOC105371754 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371754 Gene

Function for LOC105371754 Gene

Phenotypes From GWAS Catalog for LOC105371754 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371754 Gene

Localization for LOC105371754 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371754 Gene

Pathways & Interactions for LOC105371754 Gene

PathCards logo

SuperPathways for LOC105371754 Gene

No Data Available

Interacting Proteins for LOC105371754 Gene

Gene Ontology (GO) - Biological Process for LOC105371754 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371754 Gene

Drugs & Compounds for LOC105371754 Gene

No Compound Related Data Available

Transcripts for LOC105371754 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371754 Gene

No ASD Table

Relevant External Links for LOC105371754 Gene

GeneLoc Exon Structure for
LOC105371754

No data available for mRNA/cDNA for LOC105371754 Gene

Expression for LOC105371754 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371754 Gene

Orthologs for LOC105371754 Gene

No data available for Orthologs and Evolution for LOC105371754 Gene

Paralogs for LOC105371754 Gene

No data available for Paralogs for LOC105371754 Gene

Variants for LOC105371754 Gene

Sequence variations from dbSNP and Humsavar for LOC105371754 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1057519371 pathogenic, Familial hypoplastic, glomerulocystic kidney 37,710,577(+) GG/GGG upstream_transcript_variant
rs113042313 pathogenic, uncertain-significance, not provided, not specified 37,710,601(+) C/T upstream_transcript_variant
rs201751705 likely-benign, not specified 37,710,675(+) C/T upstream_transcript_variant
rs142240844 uncertain-significance, not specified 37,710,457(+) TCTTATCTTATC/TCTTATC upstream_transcript_variant
rs1000071885 -- 37,725,773(+) C/T genic_downstream_transcript_variant, non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371754 Gene

Disorders for LOC105371754 Gene

No disorders were found for LOC105371754 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371754 Gene

Publications for LOC105371754 Gene

No publications were found for LOC105371754 Gene.

No data available for External Links for LOC105371754 Gene

Products for LOC105371754 Gene

Sources for LOC105371754 Gene

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