LOC105371731 Gene (RNA Gene)

Uncharacterized LOC105371731

GC17M032259
GIFtS:
4

Aliases for LOC105371731 Gene

Subcategory (RNA class) for LOC105371731 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371731 Gene

  • Uncharacterized LOC105371731 3

External Ids for LOC105371731 Gene

Previous GeneCards Identifiers for LOC105371731 Gene

  • GC17U902274

Summaries for LOC105371731 Gene

GeneCards Summary for LOC105371731 Gene

LOC105371731 (Uncharacterized LOC105371731) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371731 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371731 Gene

Genomics for LOC105371731 Gene

GeneHancer (GH) Regulatory Elements for LOC105371731 Gene

Promoters and enhancers for LOC105371731 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH17J032264 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 750.6 -0.9 -911 2.9 CTCF PRDM1 CREM IKZF1 GLIS2 ZIC2 ZBTB8A IKZF2 ZEB2 PATZ1 RHBDL3 ENSG00000287506 LOC105371731 lnc-C17orf75-6 C17orf75 ZNF207 MIR632
GH17J032265 Enhancer 0.5 ENCODE dbSUPER 750.6 +0.9 884 0.1 CTCF REST RHBDL3 ENSG00000287506 LOC105371731 piR-34822-135 lnc-C17orf75-6
GH17J032261 Enhancer 0.7 Ensembl dbSUPER 0.6 +3.8 3750 0.2 SP7 PRDM10 ZBTB20 SCRT2 SCRT1 ZBTB17 STAT1 ZNF335 piR-34822-135 ENSG00000287506 LOC105371731 lnc-C17orf75-6 UBL5P2
GH17J032258 Enhancer 0.5 ENCODE dbSUPER 0.4 +7.0 6994 0.2 POLR2A SIN3A LOC105371731 lnc-C17orf75-6 piR-34822-135 UBL5P2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371731 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371731 Gene

Genomic Locations for LOC105371731 Gene
chr17:32,258,045-32,265,451
(GRCh38/hg38)
Size:
7,407 bases
Orientation:
Minus strand

Genomic View for LOC105371731 Gene

Genes around LOC105371731 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371731 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371731 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC105371731 Gene

Proteins for LOC105371731 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC105371731 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371731 Gene

Domains & Families for LOC105371731 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371731 Gene

Function for LOC105371731 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371731 Gene

Localization for LOC105371731 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371731 Gene

Pathways & Interactions for LOC105371731 Gene

PathCards logo

SuperPathways for LOC105371731 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105371731 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371731 Gene

Drugs & Compounds for LOC105371731 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC105371731 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371731 Gene

No ASD Table

Relevant External Links for LOC105371731 Gene

GeneLoc Exon Structure for
LOC105371731

No data available for mRNA/cDNA for LOC105371731 Gene

Expression for LOC105371731 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371731 Gene

Orthologs for LOC105371731 Gene

No data available for Orthologs and Evolution for LOC105371731 Gene

Paralogs for LOC105371731 Gene

No data available for Paralogs for LOC105371731 Gene

Variants for LOC105371731 Gene

Sequence variations from dbSNP and Humsavar for LOC105371731 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000555344 -- 32,266,043(-) G/A upstream_transcript_variant
rs1001226550 -- 32,263,696(-) G/A intron_variant
rs1001659790 -- 32,260,623(-) G/A intron_variant
rs1002103770 -- 32,266,769(-) C/G/T upstream_transcript_variant
rs1002229082 -- 32,265,123(-) C/G/T intron_variant, non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371731 Gene

Disorders for LOC105371731 Gene

No disorders were found for LOC105371731 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371731 Gene

Publications for LOC105371731 Gene

No publications were found for LOC105371731 Gene.

No data available for External Links for LOC105371731 Gene

Products for LOC105371731 Gene

Sources for LOC105371731 Gene