Aliases for LOC105371712 Gene

Subcategory (RNA class) for LOC105371712 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371712 Gene

  • Uncharacterized LOC105371712 3
  • CTD-2008P7.8 3

External Ids for LOC105371712 Gene

Previous GeneCards Identifiers for LOC105371712 Gene

  • GC17U902434

Summaries for LOC105371712 Gene

GeneCards Summary for LOC105371712 Gene

LOC105371712 (Uncharacterized LOC105371712) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371712 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371712 Gene

Genomics for LOC105371712 Gene

GeneHancer (GH) Regulatory Elements for LOC105371712 Gene

Promoters and enhancers for LOC105371712 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J028250 Promoter/Enhancer 1.2 ENCODE CraniofacialAtlas 750.6 -0.7 -696 1.7 CTCF USF2 CC2D1A L3MBTL2 RAD21 TEAD4 SP1 ZNF148 MLLT1 CBFA2T2 LOC105371712 lnc-IFT20-2 PHF12 SDF2 SUPT6H ENSG00000265908 POLDIP2 TMEM97 ENSG00000264486
GH17J028248 Enhancer 0.5 Ensembl 0.6 +2.5 2454 0.4 CC2D1A PKNOX1 ZIC2 REST PRDM10 ZNF629 ZBTB5 ATF2 ATF7 ENSG00000266830 PPY2P lnc-NLK-6 PYY2 LOC105371712
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371712 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371712 Gene

Genomic Locations for LOC105371712 Gene
chr17:28,246,454-28,250,834
(GRCh38/hg38)
Size:
4,381 bases
Orientation:
Minus strand

Genomic View for LOC105371712 Gene

Genes around LOC105371712 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371712 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371712 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371712 Gene

Proteins for LOC105371712 Gene

Post-translational modifications for LOC105371712 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371712 Gene

Domains & Families for LOC105371712 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371712 Gene

Function for LOC105371712 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371712 Gene

Localization for LOC105371712 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371712 Gene

Pathways & Interactions for LOC105371712 Gene

PathCards logo

SuperPathways for LOC105371712 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105371712 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371712 Gene

Drugs & Compounds for LOC105371712 Gene

No Compound Related Data Available

Transcripts for LOC105371712 Gene

mRNA/cDNA for LOC105371712 Gene

(1) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371712 Gene

No ASD Table

Relevant External Links for LOC105371712 Gene

GeneLoc Exon Structure for
LOC105371712

Expression for LOC105371712 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371712 Gene

Orthologs for LOC105371712 Gene

No data available for Orthologs and Evolution for LOC105371712 Gene

Paralogs for LOC105371712 Gene

No data available for Paralogs for LOC105371712 Gene

Variants for LOC105371712 Gene

Sequence variations from dbSNP and Humsavar for LOC105371712 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000349903 -- 28,245,958(-) T/C/G downstream_transcript_variant
rs1000808556 -- 28,251,295(-) C/T upstream_transcript_variant
rs1001470524 -- 28,246,932(-) C/T non_coding_transcript_variant
rs1001813878 -- 28,251,946(-) C/T upstream_transcript_variant
rs1001879969 -- 28,251,296(-) C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371712 Gene

Disorders for LOC105371712 Gene

No disorders were found for LOC105371712 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371712 Gene

Publications for LOC105371712 Gene

No publications were found for LOC105371712 Gene.

No data available for External Links for LOC105371712 Gene

Products for LOC105371712 Gene

Sources for LOC105371712 Gene