Aliases for LOC105371705 Gene

Subcategory (RNA class) for LOC105371705 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371705 Gene

  • Uncharacterized LOC105371705 3

External Ids for LOC105371705 Gene

Previous GeneCards Identifiers for LOC105371705 Gene

  • GC17U902389

Summaries for LOC105371705 Gene

GeneCards Summary for LOC105371705 Gene

LOC105371705 (Uncharacterized LOC105371705) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371705 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371705 Gene

Genomics for LOC105371705 Gene

GeneHancer (GH) Regulatory Elements for LOC105371705 Gene

Promoters and enhancers for LOC105371705 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J027403 Enhancer 0.9 Ensembl ENCODE 750.6 +1.7 1705 1 SMARCE1 L3MBTL2 TEAD4 SMARCA4 TRIM24 GMEB1 IKZF1 CEBPA HDAC1 ZNF316 LOC105371705 KSR1 NOS2 HSALNG0115395
GH17J027408 Enhancer 0.7 Ensembl ENCODE 0.6 -3.2 -3195 1.6 ZIC2 ZNF585B SP1 FOSL2 ZNF335 CTCF GLIS1 RARA ZNF398 SMARCA5 SARM1 KSR1 ENSG00000266356 LOC105371705
GH17J027379 Enhancer 1.2 ENCODE CraniofacialAtlas 0.3 +24.8 24770 1.9 SP1 CTCF SMARCE1 RBPJ USF2 MIXL1 RUNX1 MYC CC2D1A L3MBTL2 HSALNG0115395 KSR1 TMEM199 SYPL1P2 ITM2BP1 LYRM9 HSALNG0115394 LOC105371705
GH17J027397 Enhancer 0.7 Ensembl ENCODE 0.4 +8.0 8005 2.8 MAX MAFK ZNF316 NFE2 MAFG EMSY KSR1 LOC105371705 HSALNG0115395 HSALNG0115394
GH17J027388 Enhancer 0.7 Ensembl ENCODE 0.4 +17.1 17054 0.7 CTCF CC2D1A HLF CEBPG CEBPA CEBPB RUNX3 RAD21 SMC3 ZNF143 KSR1 HSALNG0115395 HSALNG0115394 LOC105371705
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371705 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371705 Gene

Genomic Locations for LOC105371705 Gene
chr17:27,398,138-27,405,406
(GRCh38/hg38)
Size:
7,269 bases
Orientation:
Minus strand

Genomic View for LOC105371705 Gene

Genes around LOC105371705 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371705 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371705 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371705 Gene

Proteins for LOC105371705 Gene

Post-translational modifications for LOC105371705 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371705 Gene

Domains & Families for LOC105371705 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371705 Gene

Function for LOC105371705 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371705 Gene

Localization for LOC105371705 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371705 Gene

Pathways & Interactions for LOC105371705 Gene

PathCards logo

SuperPathways for LOC105371705 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105371705 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371705 Gene

Drugs & Compounds for LOC105371705 Gene

No Compound Related Data Available

Transcripts for LOC105371705 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371705 Gene

No ASD Table

Relevant External Links for LOC105371705 Gene

GeneLoc Exon Structure for
LOC105371705

No data available for mRNA/cDNA for LOC105371705 Gene

Expression for LOC105371705 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371705 Gene

Orthologs for LOC105371705 Gene

No data available for Orthologs and Evolution for LOC105371705 Gene

Paralogs for LOC105371705 Gene

No data available for Paralogs for LOC105371705 Gene

Variants for LOC105371705 Gene

Sequence variations from dbSNP and Humsavar for LOC105371705 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000007284 -- 27,404,757(-) A/T intron_variant
rs1000120417 -- 27,405,267(-) G/A intron_variant
rs1000149539 -- 27,404,549(-) T/C intron_variant
rs1000166756 -- 27,414,590(-) G/T upstream_transcript_variant
rs1000241938 -- 27,410,894(-) G/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371705 Gene

Disorders for LOC105371705 Gene

No disorders were found for LOC105371705 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371705 Gene

Publications for LOC105371705 Gene

No publications were found for LOC105371705 Gene.

No data available for External Links for LOC105371705 Gene

Products for LOC105371705 Gene

Sources for LOC105371705 Gene