Aliases for LOC105371702 Gene

Subcategory (RNA class) for LOC105371702 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371702 Gene

  • Uncharacterized LOC105371702 3

External Ids for LOC105371702 Gene

Previous GeneCards Identifiers for LOC105371702 Gene

  • GC01U904637

Summaries for LOC105371702 Gene

GeneCards Summary for LOC105371702 Gene

LOC105371702 (Uncharacterized LOC105371702) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371702 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371702 Gene

Genomics for LOC105371702 Gene

GeneHancer (GH) Regulatory Elements for LOC105371702 Gene

Promoters and enhancers for LOC105371702 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J205772 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 750.6 -1.0 -1037 4.7 SIN3A ZBTB40 SIX5 SMARCE1 POLR2A USF2 ATF1 CREB1 HCFC1 MYC RAB29 ENSG00000285521 LOC105371702 lnc-SLC41A1-3 lnc-SLC41A1-4 PM20D1 ELK4 EIF2D ENSG00000234981 TMCC2
GH01J205783 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +8.0 8029 2 SP1 NFE2 JUND YY1 CTCF HNF4A RXRA MAX RAB29 NUCKS1 ENSG00000285521 LOC105371702 piR-37170-008 lnc-RAB29-1
GH01J205777 Enhancer 0.4 Ensembl 0.6 +2.8 2830 2.4 PRDM1 PRDM10 GABPA piR-37170-008 RAB29 PM20D1 NUCKS1 MFSD4A ELK4 LOC100420878 ENSG00000285521 LOC105371702 lnc-RAB29-1
GH01J205781 Enhancer 0.3 Ensembl 0.4 +5.9 5930 0.2 PRDM1 PM20D1 NUCKS1 MFSD4A ELK4 LOC100420878 piR-37170-008 ENSG00000285521 LOC105371702 lnc-RAB29-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371702 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371702 Gene

Genomic Locations for LOC105371702 Gene
chr1:205,775,571-205,783,623
(GRCh38/hg38)
Size:
8,053 bases
Orientation:
Plus strand

Genomic View for LOC105371702 Gene

Genes around LOC105371702 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371702 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371702 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371702 Gene

Proteins for LOC105371702 Gene

Post-translational modifications for LOC105371702 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371702 Gene

Domains & Families for LOC105371702 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371702 Gene

Function for LOC105371702 Gene

Phenotypes From GWAS Catalog for LOC105371702 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371702 Gene

Localization for LOC105371702 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371702 Gene

Pathways & Interactions for LOC105371702 Gene

PathCards logo

SuperPathways for LOC105371702 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105371702 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371702 Gene

Drugs & Compounds for LOC105371702 Gene

No Compound Related Data Available

Transcripts for LOC105371702 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371702 Gene

No ASD Table

Relevant External Links for LOC105371702 Gene

GeneLoc Exon Structure for
LOC105371702

No data available for mRNA/cDNA for LOC105371702 Gene

Expression for LOC105371702 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371702 Gene

Orthologs for LOC105371702 Gene

No data available for Orthologs and Evolution for LOC105371702 Gene

Paralogs for LOC105371702 Gene

No data available for Paralogs for LOC105371702 Gene

Variants for LOC105371702 Gene

Sequence variations from dbSNP and Humsavar for LOC105371702 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000335662 -- 205,774,301(+) C/A upstream_transcript_variant
rs1000399272 -- 205,774,495(+) C/T upstream_transcript_variant
rs1000678907 -- 205,782,278(+) T/C/G intron_variant
rs1000711613 -- 205,782,086(+) C/T intron_variant
rs1000970962 -- 205,776,157(+) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371702 Gene

Disorders for LOC105371702 Gene

No disorders were found for LOC105371702 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371702 Gene

Publications for LOC105371702 Gene

No publications were found for LOC105371702 Gene.

No data available for External Links for LOC105371702 Gene

Products for LOC105371702 Gene

Sources for LOC105371702 Gene