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Aliases for LOC105371688 Gene
Subcategory (RNA class) for LOC105371688 Gene
ncRNA
Quality Score for this RNA gene is
13
Aliases for LOC105371688 Gene
- Uncharacterized LOC105371688 3
External Ids for LOC105371688 Gene
- Entrez Gene: 105371688
Previous GeneCards Identifiers for LOC105371688 Gene
- GC01U904964
Summaries for LOC105371688 Gene
GeneCards Summary for LOC105371688 Gene
LOC105371688 (Uncharacterized LOC105371688) is an RNA Gene, and is affiliated with the ncRNA class.
Additional gene information for LOC105371688 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371688 Gene
Genomics for LOC105371688 Gene
GeneHancer (GH) Regulatory Elements for LOC105371688 Gene
Promoters and enhancers for LOC105371688 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH01J203511 | Enhancer | 1.5 | FANTOM5 ENCODE CraniofacialAtlas dbSUPER | 750.6 | +0.5 | 541 | 3.6 | SIN3A SMARCE1 POLR2A MYC L3MBTL2 MAX MNT NCOA3 SP7 PRDM1 | HSALNG0009804 LOC105371688 lnc-OPTC-2 ATP2B4 PRELP BTG2 | |
| GH01J203519 | Enhancer | 1.3 | FANTOM5 ENCODE dbSUPER | 0.4 | -7.1 | -7111 | 3.7 | SREBF1 TCF7L2 ZNF217 POU5F1 TEAD4 SP1 NCOA3 CBFA2T2 SMARCA4 FOSL2 | lnc-OPTC-1 OPTC PRELP ATP2B4 ENSG00000229652 FMOD BTG2 SNRPE PPFIA4 LOC105371688 | |
| GH01J203518 | Enhancer | 0.3 | CraniofacialAtlas | 0.6 | -3.2 | -3202 | 0.2 | ZFHX2 | ATP2B4 LOC105371688 lnc-OPTC-2 lnc-OPTC-1 | |
| GH01J203520 | Enhancer | 0.3 | CraniofacialAtlas | 0.6 | -3.8 | -3802 | 0.6 | ZFHX2 | PRELP ATP2B4 LOC105371688 lnc-OPTC-1 lnc-OPTC-2 | |
| GH01J203517 | Enhancer | 0.2 | CraniofacialAtlas | 0.6 | -2.6 | -2602 | 0.2 | ATP2B4 LOC105371688 lnc-OPTC-2 lnc-OPTC-1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC105371688 on UCSC Golden Path with GeneCards custom track
Genomic Locations for LOC105371688 Gene
Genomic Locations for LOC105371688 Gene
- chr1:203,510,493-203,513,771
- (GRCh38/hg38)
- Size:
- 3,279 bases
- Orientation:
- Minus strand
Genomic View for LOC105371688 Gene
Genes around LOC105371688 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1q32.1 by Entrez Gene
LOC105371688 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC105371688 Gene
Proteins for LOC105371688 Gene
Post-translational modifications for LOC105371688 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105371688
- Origene Custom Protein Services for LOC105371688
No data available for DME Specific Peptides for LOC105371688 Gene
Domains & Families for LOC105371688 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371688 Gene
Function for LOC105371688 Gene
Phenotypes From GWAS Catalog for LOC105371688 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371688 Gene
Localization for LOC105371688 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371688 Gene
Transcripts for LOC105371688 Gene
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LOC105371688 Gene
- GeneLoc Exon Structure for
- LOC105371688
No data available for mRNA/cDNA for LOC105371688 Gene
Expression for LOC105371688 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371688 Gene
Orthologs for LOC105371688 Gene
No data available for Orthologs and Evolution for LOC105371688 Gene
Paralogs for LOC105371688 Gene
No data available for Paralogs for LOC105371688 Gene
Variants for LOC105371688 Gene
| SNP ID | Clin | Chr 01 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000191026 | -- | 203,508,414(-) | G/A | intron_variant | |
| rs1000297824 | -- | 203,511,154(-) | G/A | intron_variant | |
| rs1000304863 | -- | 203,511,821(-) | G/A | intron_variant | |
| rs1000356924 | -- | 203,511,534(-) | C/T | intron_variant | |
| rs1000428075 | -- | 203,505,949(-) | AGAG/AG | intron_variant |
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371688 Gene
Disorders for LOC105371688 Gene
No disorders were found for LOC105371688 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371688 Gene
Publications for LOC105371688 Gene
No publications were found for LOC105371688 Gene.
No data available for External Links for LOC105371688 Gene
Products for LOC105371688 Gene
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- Custom Antibody Services
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- Custom Assay Services
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- Origene Custom Protein Services for LOC105371688
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- Lentiviral ORF Clones
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Sources for LOC105371688 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) CGAP SAGE
- (31) SOURCE
- (32) HomoloGene
- (33) PanEnsembl
- (34) euGenes
- (35) SGD
- (36) FlyBase
- (37) WormBase
- (38) Pseudogene
- (39) DGV
- (40) dbSNP
- (41) GenAtlas
- (42) HGMD
- (43) GAD
- (44) BGMUT
- (45) HuGE
- (46) Atlas
- (47) GenBank
- (48) H-invDB
- (49) HORDE
- (50) HUGE
- (51) IMGT
- (52) Leiden
- (53) miRBase
- (54) DME
- (55) OriGene
- (56) PubMed
- (57) R&D Systems
- (58) TGDB
- (59) Tocris
- (60) Abcam
- (61) Novus Biologicals
- (62) ProSpec
- (63) Sino Biological
- (64) GenScript
- (65) Qiagen
- (66) OCA
- (67) Proteopedia
- (68) MOPED
- (69) neXtProt
- (70) Reactome
- (71) GeneGo (Thomson Reuters)
- (72) DISEASES
- (73) SIMAP
- (74) GenomeRNAi
- (75) LifeMap
- (76) miRTarBase
- (77) MalaCards
- (78) Invitrogen
- (79) BitterDB
- (80) ESI-BIO
- (81) RefSeq
- (82) BioSystems
- (83) MaxQB
- (84) IUPHAR
- (85) BioGPS
- (86) Illumina
- (87) COMPARTMENTS
- (88) HOMER
- (89) PaxDb
- (90) ApexBio
- (91) Addgene
- (92) antibodies-online
- (93) CYP
- (94) NONCODE
- (95) TreeFam
- (96) PathCards
- (97) GeneReviews
- (98) GeneTex
- (99) Taconic Biosciences
- (100) GTEx
- (101) ProteomicsDB
- (102) SCBT
- (103) DGIdb
- (104) ClinicalTrials
- (105) RVIS
- (106) SIGNOR
- (107) diseasecard
- (108) NIH Rare Diseases
- (109) Orphanet
- (110) UMLS
- (111) GTR
- (112) Disease Ontology
- (113) Genetics Home Reference
- (114) MeSH
- (115) MedlinePlus
- (116) CDC
- (117) NINDS
- (118) NCBI Bookshelf
- (119) ClinVar
- (120) Gene Damage Index
- (121) HPO
- (122) UDN
- (123) VISTA
- (124) FANTOM5
- (125) ENCODE
- (126) ProSci
- (127) Horizon
- (128) NURSA
- (129) IID
- (130) VectorBuilder
- (131) SNPedia
- (132) BRCA Exchange
- (133) CIViC
- (134) ProteoGenix
- (135) dbSUPER
- (136) TISSUES
- (137) Gene ORGANizer
- (138) abm
- (139) Human Protein Atlas
- (140) GWAS Catalog
- (141) Monarch Initiative
- (142) DataMed
- (143) HumanCyc
- (144) genomics-online
- (145) UCNEbase
- (146) EPDnew
- (147) Applied Biosystems
- (148) GlyConnect
- (149) Aminode
- (150) GeneCopoeia
- (151) GPS-Prot
- (152) RNACentral
- (153) LncRNADisease
- (154) LOVD
- (155) miR2Disease
- (156) DiseaseEnhancer
- (157) Boster Bio
- (158) Biorbyt
- (159) Biocompare
- (160) Mastermind
- (161) CTD^2 Dashboard
- (162) CraniofacialAtlas
- (163) GeneImprint
- (164) Synthego
- (165) Bio Basic
- (166) ENA
- (167) GtRNAdb
- (168) LncBase
- (169) LncBook
- (170) LNCipedia
- (171) LncRNAdb
- (172) Modomics
- (173) PDBe
- (174) Rfam
- (175) SILVA
- (176) snOPY
- (177) SRPDB
- (178) GENCODE
- (179) TarBase
- (180) MyBioSource