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Aliases for LOC105371664 Gene

Subcategory (RNA class) for LOC105371664 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371664 Gene

  • Uncharacterized LOC105371664 3

External Ids for LOC105371664 Gene

Previous GeneCards Identifiers for LOC105371664 Gene

  • GC01U905012

Summaries for LOC105371664 Gene

GeneCards Summary for LOC105371664 Gene

LOC105371664 (Uncharacterized LOC105371664) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371664 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371664 Gene

Genomics for LOC105371664 Gene

GeneHancer (GH) Regulatory Elements for LOC105371664 Gene

Promoters and enhancers for LOC105371664 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J192628 Enhancer 0.3 FANTOM5 600.7 +0.5 455 0.2 RCOR1 LOC105371664 RGS13 RGS1 GC01P192596 ENSG00000285280
GH01J192608 Promoter/Enhancer 1.8 EPDnew FANTOM5 ENCODE dbSUPER 0.4 +19.6 19619 1.3 SP1 ZNF687 RELA CREM MLLT1 RAD21 ZBED1 IKZF1 CREB1 ZBTB33 RGS13 RGS1 RO60 RGS2 GC01P192596 LOC105371664 ENSG00000285280
GH01J192575 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.2 +51.0 50966 5.9 SP1 NKRF ZNF687 CTCF MAFK RELA CREM MLLT1 RAD21 ZBED1 RGS1 ENSG00000226723 RO60 CDC73 ENSG00000231767 RGS2 GC01P192596 LOC105371664 ENSG00000285280
GH01J192605 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.3 +23.8 23805 0.3 SP1 ZNF687 CREM MLLT1 IKZF1 IKZF2 TRIM22 PKNOX1 CBFB PAX8 RGS1 RGS13 RO60 RGS2 GC01P192596 LOC105371664 ENSG00000285280
GH01J192633 Promoter 0.6 Ensembl 0.7 -4.5 -4489 0.2 SOX13 RGS13 LOC105371664 ENSG00000285280
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371664 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371664 Gene

Genomic Locations for LOC105371664 Gene
chr1:192,491,751-192,629,012
(GRCh38/hg38)
Size:
137,262 bases
Orientation:
Minus strand

Genomic View for LOC105371664 Gene

Genes around LOC105371664 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371664 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371664 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371664 Gene

Proteins for LOC105371664 Gene

Post-translational modifications for LOC105371664 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371664 Gene

Domains & Families for LOC105371664 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371664 Gene

Function for LOC105371664 Gene

Phenotypes From GWAS Catalog for LOC105371664 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371664 Gene

Localization for LOC105371664 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371664 Gene

Pathways & Interactions for LOC105371664 Gene

PathCards logo

SuperPathways for LOC105371664 Gene

No Data Available

Interacting Proteins for LOC105371664 Gene

Gene Ontology (GO) - Biological Process for LOC105371664 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371664 Gene

Drugs & Compounds for LOC105371664 Gene

No Compound Related Data Available

Transcripts for LOC105371664 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371664 Gene

No ASD Table

Relevant External Links for LOC105371664 Gene

GeneLoc Exon Structure for
LOC105371664

No data available for mRNA/cDNA for LOC105371664 Gene

Expression for LOC105371664 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371664 Gene

Orthologs for LOC105371664 Gene

No data available for Orthologs and Evolution for LOC105371664 Gene

Paralogs for LOC105371664 Gene

No data available for Paralogs for LOC105371664 Gene

Variants for LOC105371664 Gene

Sequence variations from dbSNP and Humsavar for LOC105371664 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000031258 -- 192,532,457(-) T/C intron_variant
rs1000082052 -- 192,582,669(-) A/G intron_variant
rs1000123773 -- 192,622,937(-) T/C intron_variant
rs1000151833 -- 192,614,710(-) T/C intron_variant
rs1000202774 -- 192,583,864(-) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371664 Gene

Disorders for LOC105371664 Gene

No disorders were found for LOC105371664 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371664 Gene

Publications for LOC105371664 Gene

No publications were found for LOC105371664 Gene.

No data available for External Links for LOC105371664 Gene

Products for LOC105371664 Gene

Sources for LOC105371664 Gene

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