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Aliases for LOC105371649 Gene

Subcategory (RNA class) for LOC105371649 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371649 Gene

  • Uncharacterized LOC105371649 3

External Ids for LOC105371649 Gene

Previous GeneCards Identifiers for LOC105371649 Gene

  • GC01U905134

Summaries for LOC105371649 Gene

GeneCards Summary for LOC105371649 Gene

LOC105371649 (Uncharacterized LOC105371649) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371649 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371649 Gene

Genomics for LOC105371649 Gene

GeneHancer (GH) Regulatory Elements for LOC105371649 Gene

Promoters and enhancers for LOC105371649 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J184752 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE 600.7 -0.4 -446 3.7 HDGF SP1 ELF3 MNT SIX5 ZNF148 NKRF POLR2A MLLT1 ZNF121 EDEM3 LOC105371649 SWT1 GC01M184689
GH01J184758 Enhancer 0.8 Ensembl ENCODE 0.7 +4.5 4520 1.1 ZNF652 SP1 PPARG FOXA2 GATA3 FOXA1 HNF4A FOXA3 HLF GC01P184758 EDEM3 NIBAN1 LOC105371649 GC01M184821
GH01J184770 Enhancer 0.9 Ensembl 0.4 +15.8 15803 1.2 ZNF121 YY1 SP7 MZF1 DPF2 IKZF1 ZNF512 ZIC2 ATF1 PKNOX1 EDEM3 GC01P184758 LOC105371649 GC01M184821
GH01J184773 Enhancer 0.8 Ensembl ENCODE 0.4 +19.0 18960 1 NR2C1 MGA NR2C2 MNT ZNF592 BHLHE40 GLIS1 RNF2 L3MBTL2 EDEM3 GC01P184758 LOC105371649 GC01M184821
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371649 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371649 Gene

Genomic Locations for LOC105371649 Gene
chr1:184,754,973-184,776,029
(GRCh38/hg38)
Size:
21,057 bases
Orientation:
Plus strand

Genomic View for LOC105371649 Gene

Genes around LOC105371649 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371649 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371649 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371649 Gene

Proteins for LOC105371649 Gene

Post-translational modifications for LOC105371649 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371649 Gene

Domains & Families for LOC105371649 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371649 Gene

Function for LOC105371649 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371649 Gene

Localization for LOC105371649 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371649 Gene

Pathways & Interactions for LOC105371649 Gene

PathCards logo

SuperPathways for LOC105371649 Gene

No Data Available

Interacting Proteins for LOC105371649 Gene

Gene Ontology (GO) - Biological Process for LOC105371649 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371649 Gene

Drugs & Compounds for LOC105371649 Gene

No Compound Related Data Available

Transcripts for LOC105371649 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371649 Gene

No ASD Table

Relevant External Links for LOC105371649 Gene

GeneLoc Exon Structure for
LOC105371649

No data available for mRNA/cDNA for LOC105371649 Gene

Expression for LOC105371649 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371649 Gene

Orthologs for LOC105371649 Gene

No data available for Orthologs and Evolution for LOC105371649 Gene

Paralogs for LOC105371649 Gene

No data available for Paralogs for LOC105371649 Gene

Variants for LOC105371649 Gene

Sequence variations from dbSNP and Humsavar for LOC105371649 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000123835 -- 184,765,571(+) G/A intron_variant
rs1000251517 -- 184,771,825(+) A/G intron_variant
rs1000290162 -- 184,765,868(+) G/A intron_variant
rs1000649986 -- 184,753,925(+) T/A upstream_transcript_variant
rs1000780169 -- 184,760,144(+) C/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371649 Gene

Disorders for LOC105371649 Gene

No disorders were found for LOC105371649 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371649 Gene

Publications for LOC105371649 Gene

No publications were found for LOC105371649 Gene.

No data available for External Links for LOC105371649 Gene

Products for LOC105371649 Gene

Sources for LOC105371649 Gene

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