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Aliases for LOC105371648 Gene

Subcategory (RNA class) for LOC105371648 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371648 Gene

  • Uncharacterized LOC105371648 3

External Ids for LOC105371648 Gene

Previous GeneCards Identifiers for LOC105371648 Gene

  • GC01U904562

Summaries for LOC105371648 Gene

GeneCards Summary for LOC105371648 Gene

LOC105371648 (Uncharacterized LOC105371648) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371648 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371648 Gene

Genomics for LOC105371648 Gene

GeneHancer (GH) Regulatory Elements for LOC105371648 Gene

Promoters and enhancers for LOC105371648 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J184663 Promoter/Enhancer 1.3 Ensembl ENCODE 600.7 +1.0 995 0.9 CC2D1A CTCF SP7 RAD21 GLIS2 ZNF143 REST PATZ1 ZNF501 NR2C1 ENSG00000285847 LOC105371648 EDEM3
GH01J184661 Enhancer 0.2 Ensembl 600.7 -1.0 -981 0.8 LOC105371648 EDEM3 ENSG00000285847 PIR44521
GH01J184649 Enhancer 0.8 Ensembl ENCODE 0.4 -13.6 -13580 2.8 ATF7 PKNOX1 RUNX3 ATF2 NFIC NFIB ZNF610 BATF EDEM3 LOC105371648 ENSG00000285847 PIR44521
GH01J184634 Enhancer 1 FANTOM5 Ensembl ENCODE 0.3 -27.6 -27550 1.5 CREB1 CTBP1 PKNOX1 ZNF768 HNF4A FOS RNF2 EDEM3 NIBAN1 PIR44521 LOC105371648 ENSG00000285847
GH01J184629 Enhancer 0.8 Ensembl ENCODE 0.3 -33.0 -32980 2.4 SP1 RXRA ZSCAN4 JUND CREB1 YY1 NR2F2 RAD21 HNF4A ATF2 C1orf21 PIR44521 LOC105371648
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371648 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371648 Gene

Genomic Locations for LOC105371648 Gene
chr1:184,663,181-184,672,035
(GRCh38/hg38)
Size:
8,855 bases
Orientation:
Plus strand

Genomic View for LOC105371648 Gene

Genes around LOC105371648 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371648 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371648 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371648 Gene

Proteins for LOC105371648 Gene

Post-translational modifications for LOC105371648 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371648 Gene

Domains & Families for LOC105371648 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371648 Gene

Function for LOC105371648 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371648 Gene

Localization for LOC105371648 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371648 Gene

Pathways & Interactions for LOC105371648 Gene

PathCards logo

SuperPathways for LOC105371648 Gene

No Data Available

Interacting Proteins for LOC105371648 Gene

Gene Ontology (GO) - Biological Process for LOC105371648 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371648 Gene

Drugs & Compounds for LOC105371648 Gene

No Compound Related Data Available

Transcripts for LOC105371648 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371648 Gene

No ASD Table

Relevant External Links for LOC105371648 Gene

GeneLoc Exon Structure for
LOC105371648

No data available for mRNA/cDNA for LOC105371648 Gene

Expression for LOC105371648 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371648 Gene

Orthologs for LOC105371648 Gene

No data available for Orthologs and Evolution for LOC105371648 Gene

Paralogs for LOC105371648 Gene

No data available for Paralogs for LOC105371648 Gene

Variants for LOC105371648 Gene

Sequence variations from dbSNP and Humsavar for LOC105371648 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000227921 -- 184,663,628(+) C/G upstream_transcript_variant
rs1000339093 -- 184,668,753(+) T/C non_coding_transcript_variant
rs1000370242 -- 184,668,459(+) A/G non_coding_transcript_variant
rs1000807103 -- 184,669,502(+) C/A downstream_transcript_variant
rs1002039522 -- 184,667,033(+) C/A non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371648 Gene

Disorders for LOC105371648 Gene

No disorders were found for LOC105371648 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371648 Gene

Publications for LOC105371648 Gene

No publications were found for LOC105371648 Gene.

No data available for External Links for LOC105371648 Gene

Products for LOC105371648 Gene

Sources for LOC105371648 Gene

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