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Aliases for LOC105371636 Gene

Subcategory (RNA class) for LOC105371636 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371636 Gene

  • Uncharacterized LOC105371636 3

External Ids for LOC105371636 Gene

Previous GeneCards Identifiers for LOC105371636 Gene

  • GC01U904929
  • GC01M180185
  • GC01M180970
  • GC01M180273
  • GC01M180329
  • GC01M180429
  • GC01M180523
  • GC01M180611
  • GC01M180709
  • GC01M180800
  • GC01M180894

Summaries for LOC105371636 Gene

GeneCards Summary for LOC105371636 Gene

LOC105371636 (Uncharacterized LOC105371636) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371636 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371636 Gene

Genomics for LOC105371636 Gene

GeneHancer (GH) Regulatory Elements for LOC105371636 Gene

Promoters and enhancers for LOC105371636 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J180150 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 600.7 -0.4 -408 8.8 MTA3 ZNF652 SP1 CC2D1A ZFX ELF3 CBFA2T2 NKRF CEBPG RERE QSOX1 LOC105371636 ACBD6 ENSG00000261831 AXDND1 ENSG00000260360 TOR1AIP1 CEP350 PIR57354 GC01M181203
GH01J180130 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 +22.0 21968 11.9 ZNF652 CBFA2T2 ZNF121 CEBPG TRIM24 SP1 EGR1 RXRA IKZF1 SOX13 GC01P180130 QSOX1 ENSG00000261831 ENSG00000260360 LHX4 LOC105371636 GC01M181203
GH01J180144 Enhancer 0.3 Ensembl 0.4 +9.3 9338 1 TSC22D4 ENSG00000261831 QSOX1 LOC105371636 GC01P180130 GC01M181203
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371636 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371636 Gene

Genomic Locations for LOC105371636 Gene
chr1:180,152,608-180,154,439
(GRCh38/hg38)
Size:
1,832 bases
Orientation:
Minus strand

Genomic View for LOC105371636 Gene

Genes around LOC105371636 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371636 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371636 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371636 Gene

Proteins for LOC105371636 Gene

Post-translational modifications for LOC105371636 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371636 Gene

Domains & Families for LOC105371636 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371636 Gene

Function for LOC105371636 Gene

Phenotypes From GWAS Catalog for LOC105371636 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371636 Gene

Localization for LOC105371636 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371636 Gene

Pathways & Interactions for LOC105371636 Gene

PathCards logo

SuperPathways for LOC105371636 Gene

No Data Available

Interacting Proteins for LOC105371636 Gene

Gene Ontology (GO) - Biological Process for LOC105371636 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371636 Gene

Drugs & Compounds for LOC105371636 Gene

No Compound Related Data Available

Transcripts for LOC105371636 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371636 Gene

No ASD Table

Relevant External Links for LOC105371636 Gene

GeneLoc Exon Structure for
LOC105371636

No data available for mRNA/cDNA for LOC105371636 Gene

Expression for LOC105371636 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371636 Gene

Orthologs for LOC105371636 Gene

No data available for Orthologs and Evolution for LOC105371636 Gene

Paralogs for LOC105371636 Gene

No data available for Paralogs for LOC105371636 Gene

Variants for LOC105371636 Gene

Sequence variations from dbSNP and Humsavar for LOC105371636 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000454369 -- 180,155,367(-) C/T upstream_transcript_variant
rs1000486820 -- 180,153,663(-) G/A intron_variant
rs1001226987 -- 180,152,245(-) C/T downstream_transcript_variant
rs1001443083 -- 180,156,084(-) A/T upstream_transcript_variant
rs1002520714 -- 180,155,199(-) C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371636 Gene

Disorders for LOC105371636 Gene

No disorders were found for LOC105371636 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371636 Gene

Publications for LOC105371636 Gene

No publications were found for LOC105371636 Gene.

No data available for External Links for LOC105371636 Gene

Products for LOC105371636 Gene

Sources for LOC105371636 Gene

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