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Aliases for LOC105371632 Gene

Subcategory (RNA class) for LOC105371632 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371632 Gene

  • Uncharacterized LOC105371632 3

External Ids for LOC105371632 Gene

Previous GeneCards Identifiers for LOC105371632 Gene

  • GC01U904880

Summaries for LOC105371632 Gene

GeneCards Summary for LOC105371632 Gene

LOC105371632 (Uncharacterized LOC105371632) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371632 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371632 Gene

Genomics for LOC105371632 Gene

GeneHancer (GH) Regulatory Elements for LOC105371632 Gene

Promoters and enhancers for LOC105371632 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J178580 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 600.7 -1.3 -1311 1.7 SP1 NFIB POLR2A IKZF2 RELA EED RUNX3 IKZF1 NFIC EBF1 LOC105371632 TEX35 C1orf220 RALGPS2 GC01P178598
GH01J178575 Enhancer 0.8 ENCODE dbSUPER 0.7 +4.2 4172 1.3 ZNF384 IKZF1 IKZF2 RFX1 EED FOXM1 ZNF664 PRDM6 GC01M178575 C1orf220 TEX35 ENSG00000201791 LOC105371632 GC01P178569
GH01J178574 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +6.5 6546 2.5 ZNF652 SP1 PKNOX1 RXRA ZSCAN4 RUNX3 JUND RAD21 BATF HNF4A TEX35 C1orf220 ENSG00000201791 GC01M178575 GC01P178569 LOC105371632
GH01J178566 Enhancer 0.8 Ensembl dbSUPER 0.4 +13.9 13875 0.6 RELA IKZF1 IKZF2 MNT CBFB DPF2 EED RUNX3 BCL11A JUNB TEX35 RALGPS2 GC01P178569 RNA5SP69 LOC105371632
GH01J178564 Enhancer 0.8 Ensembl dbSUPER 0.4 +15.3 15276 1 SP1 PPARG FOXA2 TCF7 YY1 HNF4A SMAD4 RXRA RARA HNF4G TEX35 RNA5SP69 GC01P178569 LOC105371632
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371632 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371632 Gene

Genomic Locations for LOC105371632 Gene
chr1:178,554,390-178,580,176
(GRCh38/hg38)
Size:
25,787 bases
Orientation:
Minus strand

Genomic View for LOC105371632 Gene

Genes around LOC105371632 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371632 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371632 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371632 Gene

Proteins for LOC105371632 Gene

Post-translational modifications for LOC105371632 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371632 Gene

Domains & Families for LOC105371632 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371632 Gene

Function for LOC105371632 Gene

Phenotypes From GWAS Catalog for LOC105371632 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371632 Gene

Localization for LOC105371632 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371632 Gene

Pathways & Interactions for LOC105371632 Gene

PathCards logo

SuperPathways for LOC105371632 Gene

No Data Available

Interacting Proteins for LOC105371632 Gene

Gene Ontology (GO) - Biological Process for LOC105371632 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371632 Gene

Drugs & Compounds for LOC105371632 Gene

No Compound Related Data Available

Transcripts for LOC105371632 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371632 Gene

No ASD Table

Relevant External Links for LOC105371632 Gene

GeneLoc Exon Structure for
LOC105371632

No data available for mRNA/cDNA for LOC105371632 Gene

Expression for LOC105371632 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371632 Gene

Orthologs for LOC105371632 Gene

No data available for Orthologs and Evolution for LOC105371632 Gene

Paralogs for LOC105371632 Gene

No data available for Paralogs for LOC105371632 Gene

Variants for LOC105371632 Gene

Sequence variations from dbSNP and Humsavar for LOC105371632 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000269210 -- 178,568,204(-) G/A intron_variant
rs1000369888 -- 178,555,842(-) G/C intron_variant
rs1000371128 -- 178,580,544(-) T/A upstream_transcript_variant
rs1000473012 -- 178,567,900(-) T/G intron_variant
rs1000499868 -- 178,576,192(-) T/G genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371632 Gene

Disorders for LOC105371632 Gene

No disorders were found for LOC105371632 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371632 Gene

Publications for LOC105371632 Gene

No publications were found for LOC105371632 Gene.

No data available for External Links for LOC105371632 Gene

Products for LOC105371632 Gene

Sources for LOC105371632 Gene

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