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Aliases for LOC105371631 Gene

Subcategory (RNA class) for LOC105371631 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371631 Gene

  • Uncharacterized LOC105371631 3

External Ids for LOC105371631 Gene

Previous GeneCards Identifiers for LOC105371631 Gene

  • GC01U904794

Summaries for LOC105371631 Gene

GeneCards Summary for LOC105371631 Gene

LOC105371631 (Uncharacterized LOC105371631) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371631 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371631 Gene

Genomics for LOC105371631 Gene

GeneHancer (GH) Regulatory Elements for LOC105371631 Gene

Promoters and enhancers for LOC105371631 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J178532 Enhancer 0.8 ENCODE 600.7 +0.3 251 0.2 CTCF MZF1 RAD21 KAT8 IKZF1 GATAD2A ZNF143 REST TRIM22 ZBTB20 LOC105371631 TEX35
GH01J178529 Enhancer 1.1 Ensembl ENCODE 0.7 +2.6 2631 1.8 ZSCAN21 SP7 SP1 KLF14 PRDM1 KAT8 CREB1 GLIS2 POLR2A RXRA TEX35 ENSG00000201791 C1orf220 LOC105371631
GH01J178536 Enhancer 1 VISTA ENCODE 0.4 -5.1 -5052 3.7 CEBPG MAFK SP1 PPARG ZNF644 FOSL2 CREB1 RXRA ZNF600 CEBPA TEX35 C1orf220 GC01M178539 LOC105371631
GH01J178513 Promoter 0.5 EPDnew 0.4 +19.6 19642 0.1 ENSG00000285910 LOC101928866 TEX35 LOC105371631
GH01J178514 Enhancer 0.4 Ensembl 0.4 +18.9 18851 1 CTCF GABPA NFXL1 TEX35 LOC101928866 ENSG00000285910 CLEC20A RALGPS2 LOC105371631
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371631 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371631 Gene

Genomic Locations for LOC105371631 Gene
chr1:178,526,180-178,532,732
(GRCh38/hg38)
Size:
6,553 bases
Orientation:
Minus strand

Genomic View for LOC105371631 Gene

Genes around LOC105371631 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371631 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371631 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371631 Gene

Proteins for LOC105371631 Gene

Post-translational modifications for LOC105371631 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371631 Gene

Domains & Families for LOC105371631 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371631 Gene

Function for LOC105371631 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371631 Gene

Localization for LOC105371631 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371631 Gene

Pathways & Interactions for LOC105371631 Gene

PathCards logo

SuperPathways for LOC105371631 Gene

No Data Available

Interacting Proteins for LOC105371631 Gene

Gene Ontology (GO) - Biological Process for LOC105371631 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371631 Gene

Drugs & Compounds for LOC105371631 Gene

No Compound Related Data Available

Transcripts for LOC105371631 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371631 Gene

No ASD Table

Relevant External Links for LOC105371631 Gene

GeneLoc Exon Structure for
LOC105371631

No data available for mRNA/cDNA for LOC105371631 Gene

Expression for LOC105371631 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371631 Gene

Orthologs for LOC105371631 Gene

No data available for Orthologs and Evolution for LOC105371631 Gene

Paralogs for LOC105371631 Gene

No data available for Paralogs for LOC105371631 Gene

Variants for LOC105371631 Gene

Sequence variations from dbSNP and Humsavar for LOC105371631 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000094069 -- 178,532,119(-) A/T genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000475743 -- 178,533,729(-) G/A upstream_transcript_variant
rs1000527679 -- 178,534,058(-) T/A upstream_transcript_variant
rs1000727936 -- 178,527,833(-) T/A intron_variant
rs1001204219 -- 178,527,415(-) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371631 Gene

Disorders for LOC105371631 Gene

No disorders were found for LOC105371631 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371631 Gene

Publications for LOC105371631 Gene

No publications were found for LOC105371631 Gene.

No data available for External Links for LOC105371631 Gene

Products for LOC105371631 Gene

Sources for LOC105371631 Gene

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