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Aliases for LOC105371600 Gene

Subcategory (RNA class) for LOC105371600 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371600 Gene

  • Uncharacterized LOC105371600 3

External Ids for LOC105371600 Gene

Previous GeneCards Identifiers for LOC105371600 Gene

  • GC01U904543

Summaries for LOC105371600 Gene

GeneCards Summary for LOC105371600 Gene

LOC105371600 (Uncharacterized LOC105371600) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371600 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371600 Gene

Genomics for LOC105371600 Gene

GeneHancer (GH) Regulatory Elements for LOC105371600 Gene

Promoters and enhancers for LOC105371600 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J167057 Enhancer 1.1 Ensembl ENCODE 0.4 +6.3 6267 0.8 CTCF MLLT1 GTF2F1 ZSCAN21 CDC5L MCM2 ZBTB7A ZNF548 PRDM1 RAD21 ENSG00000215835 DUTP6 POU2F1 MPZL1 GPA33 TADA1 DUSP27 CREG1 ENSG00000227907 LOC105371600
GH01J167059 Enhancer 1 ENCODE dbSUPER 0.4 +8.3 8335 0.8 SP1 CC2D1A CTCF MAFK PRDM1 MZF1 RAD21 DPF2 BACH1 ZNF143 GPA33 TADA1 DUSP27 ENSG00000227907 LOC105371600 LOC105371598
GH01J167043 Enhancer 0.9 ENCODE 0.4 -6.9 -6903 1.2 ZNF384 ELF1 SP7 CREM PRDM1 CREB1 GLIS2 ZBTB8A ZIC2 ATF1 MAEL LOC105371600 RNA5SP65
GH01J167066 Enhancer 1 ENCODE dbSUPER 0.4 +15.6 15646 0.2 CC2D1A CTCF PPARG RAD21 ARID2 ZBTB8A ZNF143 REST ZEB2 TRIM22 DUSP27 GPA33 POU2F1 ENSG00000227907 LOC105371600 LOC105371598
GH01J167033 Enhancer 0.4 Ensembl 0.4 -17.4 -17432 0.2 SP1 YY1 HNF4A DUSP27 GPA33 LOC105371600 RNA5SP65
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371600 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371600 Gene

Genomic Locations for LOC105371600 Gene
chr1:167,051,133-167,067,149
(GRCh38/hg38)
Size:
16,017 bases
Orientation:
Plus strand

Genomic View for LOC105371600 Gene

Genes around LOC105371600 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371600 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371600 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371600 Gene

Proteins for LOC105371600 Gene

Post-translational modifications for LOC105371600 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371600 Gene

Domains & Families for LOC105371600 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371600 Gene

Function for LOC105371600 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371600 Gene

Localization for LOC105371600 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371600 Gene

Pathways & Interactions for LOC105371600 Gene

PathCards logo

SuperPathways for LOC105371600 Gene

No Data Available

Interacting Proteins for LOC105371600 Gene

Gene Ontology (GO) - Biological Process for LOC105371600 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371600 Gene

Drugs & Compounds for LOC105371600 Gene

No Compound Related Data Available

Transcripts for LOC105371600 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371600 Gene

No ASD Table

Relevant External Links for LOC105371600 Gene

GeneLoc Exon Structure for
LOC105371600

No data available for mRNA/cDNA for LOC105371600 Gene

Expression for LOC105371600 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371600 Gene

Orthologs for LOC105371600 Gene

No data available for Orthologs and Evolution for LOC105371600 Gene

Paralogs for LOC105371600 Gene

No data available for Paralogs for LOC105371600 Gene

Variants for LOC105371600 Gene

Sequence variations from dbSNP and Humsavar for LOC105371600 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000106831 -- 167,059,168(+) A/C genic_downstream_transcript_variant, intron_variant
rs1000169540 -- 167,058,168(+) C/T intron_variant
rs1000267778 -- 167,052,899(+) C/T intron_variant
rs1000277193 -- 167,063,859(+) T/G genic_downstream_transcript_variant, intron_variant
rs1000607244 -- 167,056,170(+) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371600 Gene

Disorders for LOC105371600 Gene

No disorders were found for LOC105371600 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371600 Gene

Publications for LOC105371600 Gene

No publications were found for LOC105371600 Gene.

No data available for External Links for LOC105371600 Gene

Products for LOC105371600 Gene

Sources for LOC105371600 Gene

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