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Aliases for LOC105371561 Gene

Subcategory (RNA class) for LOC105371561 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371561 Gene

  • Uncharacterized LOC105371561 3

External Ids for LOC105371561 Gene

Previous GeneCards Identifiers for LOC105371561 Gene

  • GC01U904636

Summaries for LOC105371561 Gene

GeneCards Summary for LOC105371561 Gene

LOC105371561 (Uncharacterized LOC105371561) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371561 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371561 Gene

Genomics for LOC105371561 Gene

GeneHancer (GH) Regulatory Elements for LOC105371561 Gene

Promoters and enhancers for LOC105371561 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J165162 Enhancer 0.8 Ensembl ENCODE 0.3 -41.2 -41153 1.4 ZSCAN21 ZNF600 ZFX ZBTB48 ZBTB17 STAT1 NFIB GATA3 ZSCAN16 FOS ENSG00000238022 LMX1A LOC105371561 RNU6-755P GC01M164980
GH01J165138 Enhancer 0.8 ENCODE 0.2 -65.9 -65908 0.2 CEBPG RERE HMG20B CEBPA GATAD2A RCOR2 SOX13 TCF7 TGIF2 HHEX LOC105371561 RNU6-755P GC01M164980
GH01J165114 Enhancer 0.7 Ensembl 0.2 -86.6 -86552 6.6 CTCF ZNF680 PKNOX1 ZNF512 ZSCAN4 ZNF692 MNT SP1 EZH2 MCM3 LOC105371561 GC01M164980 RNU6-755P
GH01J165129 Enhancer 0.6 ENCODE 0.2 -74.3 -74288 0.2 CTCF PRDM1 ZNF501 EHMT2 FOXA2 ZBTB17 RAD21 ZNF654 ZNF143 XRCC5 LOC105371561 RNU6-755P GC01M164980
GH01J165169 Enhancer 0.4 Ensembl ENCODE 0.3 -35.0 -35000 0.5 LOC105371561 RNU6-755P GC01M164980
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371561 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371561 Gene

Genomic Locations for LOC105371561 Gene
chr1:165,204,047-165,213,091
(GRCh38/hg38)
Size:
9,045 bases
Orientation:
Plus strand

Genomic View for LOC105371561 Gene

Genes around LOC105371561 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371561 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371561 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371561 Gene

Proteins for LOC105371561 Gene

Post-translational modifications for LOC105371561 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371561 Gene

Domains & Families for LOC105371561 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371561 Gene

Function for LOC105371561 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371561 Gene

Localization for LOC105371561 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371561 Gene

Pathways & Interactions for LOC105371561 Gene

PathCards logo

SuperPathways for LOC105371561 Gene

No Data Available

Interacting Proteins for LOC105371561 Gene

Gene Ontology (GO) - Biological Process for LOC105371561 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371561 Gene

Drugs & Compounds for LOC105371561 Gene

No Compound Related Data Available

Transcripts for LOC105371561 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371561 Gene

No ASD Table

Relevant External Links for LOC105371561 Gene

GeneLoc Exon Structure for
LOC105371561

No data available for mRNA/cDNA for LOC105371561 Gene

Expression for LOC105371561 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371561 Gene

Orthologs for LOC105371561 Gene

No data available for Orthologs and Evolution for LOC105371561 Gene

Paralogs for LOC105371561 Gene

No data available for Paralogs for LOC105371561 Gene

Variants for LOC105371561 Gene

Sequence variations from dbSNP and Humsavar for LOC105371561 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000091407 -- 165,202,559(+) T/C upstream_transcript_variant
rs1000179389 -- 165,205,461(+) T/C genic_upstream_transcript_variant, intron_variant
rs1000677072 -- 165,205,129(+) T/C genic_upstream_transcript_variant, intron_variant
rs1001206795 -- 165,211,725(+) G/A intron_variant
rs1001229066 -- 165,206,545(+) G/A genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371561 Gene

Disorders for LOC105371561 Gene

No disorders were found for LOC105371561 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371561 Gene

Publications for LOC105371561 Gene

No publications were found for LOC105371561 Gene.

No data available for External Links for LOC105371561 Gene

Products for LOC105371561 Gene

Sources for LOC105371561 Gene

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