Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105371531 Gene

Subcategory (RNA class) for LOC105371531 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371531 Gene

  • Uncharacterized LOC105371531 3

External Ids for LOC105371531 Gene

Previous GeneCards Identifiers for LOC105371531 Gene

  • GC17U902394
  • GC17M009246
  • GC17M009248
  • GC17M009247

Summaries for LOC105371531 Gene

GeneCards Summary for LOC105371531 Gene

LOC105371531 (Uncharacterized LOC105371531) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371531 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371531 Gene

Genomics for LOC105371531 Gene

GeneHancer (GH) Regulatory Elements for LOC105371531 Gene

Promoters and enhancers for LOC105371531 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J009249 Enhancer 0.3 Ensembl 600.7 +0.6 613 0.2 RFX1 LOC105371531 PIR31843
GH17J009238 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 0.4 +7.8 7786 7.1 ZNF148 ZNF687 NFIB ZBTB7A GLIS2 ZBTB8A ZNF600 PRDM10 ZIC2 ZNF7 PIR56385 GC17P009240 PFAS ENSG00000265749 RPL26 LOC105371532 PIR31843 ENSG00000273816 LOC105371531 NTN1
GH17J009252 Enhancer 1 FANTOM5 Ensembl ENCODE 0.7 -2.1 -2110 3.7 CEBPG CEBPA ZSCAN4 CEBPB POLR2A HLF GC17P009254 GC17M009252 NTN1 PIK3R5 LOC105371531 STX8
GH17J009246 Enhancer 0.2 dbSUPER 0.7 +2.7 2688 1.8 LOC105371531 PIR31843
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371531 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371531 Gene

Genomic Locations for LOC105371531 Gene
chr17:9,243,887-9,250,114
(GRCh38/hg38)
Size:
6,228 bases
Orientation:
Minus strand

Genomic View for LOC105371531 Gene

Genes around LOC105371531 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371531 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371531 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371531 Gene

Proteins for LOC105371531 Gene

Post-translational modifications for LOC105371531 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371531 Gene

Domains & Families for LOC105371531 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371531 Gene

Function for LOC105371531 Gene

Phenotypes From GWAS Catalog for LOC105371531 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371531 Gene

Localization for LOC105371531 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371531 Gene

Pathways & Interactions for LOC105371531 Gene

PathCards logo

SuperPathways for LOC105371531 Gene

No Data Available

Interacting Proteins for LOC105371531 Gene

Gene Ontology (GO) - Biological Process for LOC105371531 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371531 Gene

Drugs & Compounds for LOC105371531 Gene

No Compound Related Data Available

Transcripts for LOC105371531 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371531 Gene

No ASD Table

Relevant External Links for LOC105371531 Gene

GeneLoc Exon Structure for
LOC105371531

No data available for mRNA/cDNA for LOC105371531 Gene

Expression for LOC105371531 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371531 Gene

Orthologs for LOC105371531 Gene

No data available for Orthologs and Evolution for LOC105371531 Gene

Paralogs for LOC105371531 Gene

No data available for Paralogs for LOC105371531 Gene

Variants for LOC105371531 Gene

Sequence variations from dbSNP and Humsavar for LOC105371531 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000204630 -- 9,249,554(-) C/T non_coding_transcript_variant
rs1000264163 -- 9,247,857(-) C/T intron_variant
rs1000445354 -- 9,249,407(-) C/T non_coding_transcript_variant
rs1000673868 -- 9,244,536(-) G/A non_coding_transcript_variant
rs1000742504 -- 9,244,715(-) T/C non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371531 Gene

Disorders for LOC105371531 Gene

No disorders were found for LOC105371531 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371531 Gene

Publications for LOC105371531 Gene

No publications were found for LOC105371531 Gene.

No data available for External Links for LOC105371531 Gene

Products for LOC105371531 Gene

Sources for LOC105371531 Gene

Content
Loading form....