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Aliases for LOC105371468 Gene

Subcategory (RNA class) for LOC105371468 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371468 Gene

  • Uncharacterized LOC105371468 3

External Ids for LOC105371468 Gene

Previous GeneCards Identifiers for LOC105371468 Gene

  • GC01U904460

Summaries for LOC105371468 Gene

GeneCards Summary for LOC105371468 Gene

LOC105371468 (Uncharacterized LOC105371468) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371468 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371468 Gene

Genomics for LOC105371468 Gene

GeneHancer (GH) Regulatory Elements for LOC105371468 Gene

Promoters and enhancers for LOC105371468 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J160536 Enhancer 0.4 Ensembl dbSUPER 600.7 +0.4 424 0.4 LOC105371468 ENSG00000234425 CD84
GH01J160538 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +5.0 5011 7.1 ZNF652 SP1 ZFX ELF3 CTCF CC2D1A ZKSCAN8 CBFA2T2 ZNF148 MLLT1 CD84 SLAMF1 VANGL2 PPOX ENSG00000228863 SLAMF8 TSTD1 SLAMF6 CD48 DCAF8
GH01J160546 Enhancer 1.2 ENCODE dbSUPER 0.4 +11.9 11944 4.5 SP1 CC2D1A ZKSCAN8 CBFA2T2 ZNF148 MLLT1 ZNF687 BACH1 MCM2 TRIM24 VANGL2 ENSG00000228606 USP21 SLAMF6 SLAMF1 ENSG00000228863 RNU4-42P DCAF8 PPOX CD84
GH01J160565 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.3 +31.6 31557 4.6 SP1 ZKSCAN8 CREM MLLT1 EGR1 SMARCA4 IKZF1 EP300 CBFB MGA CD84 VANGL2 SLAMF6 ATP1A4 SLAMF1 LY9 CD48 ENSG00000234425 LOC105371468
GH01J160558 Enhancer 0.9 ENCODE dbSUPER 0.3 +23.0 23040 1.8 MLLT1 TRIM24 MTA1 ZBTB33 ARID2 REST ZNF24 LEF1 HDAC1 ZNF316 VANGL2 SLAMF6 SLAMF1 LY9 CD84 ENSG00000234425 LOC105371468
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371468 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371468 Gene

Genomic Locations for LOC105371468 Gene
chr1:160,536,577-160,571,133
(GRCh38/hg38)
Size:
34,557 bases
Orientation:
Plus strand

Genomic View for LOC105371468 Gene

Genes around LOC105371468 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371468 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371468 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371468 Gene

Proteins for LOC105371468 Gene

Post-translational modifications for LOC105371468 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371468 Gene

Domains & Families for LOC105371468 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371468 Gene

Function for LOC105371468 Gene

Phenotypes From GWAS Catalog for LOC105371468 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371468 Gene

Localization for LOC105371468 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371468 Gene

Pathways & Interactions for LOC105371468 Gene

PathCards logo

SuperPathways for LOC105371468 Gene

No Data Available

Interacting Proteins for LOC105371468 Gene

Gene Ontology (GO) - Biological Process for LOC105371468 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371468 Gene

Drugs & Compounds for LOC105371468 Gene

No Compound Related Data Available

Transcripts for LOC105371468 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371468 Gene

No ASD Table

Relevant External Links for LOC105371468 Gene

GeneLoc Exon Structure for
LOC105371468

No data available for mRNA/cDNA for LOC105371468 Gene

Expression for LOC105371468 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371468 Gene

Orthologs for LOC105371468 Gene

No data available for Orthologs and Evolution for LOC105371468 Gene

Paralogs for LOC105371468 Gene

No data available for Paralogs for LOC105371468 Gene

Variants for LOC105371468 Gene

Sequence variations from dbSNP and Humsavar for LOC105371468 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000073501 -- 160,554,570(+) T/C intron_variant
rs1000319937 -- 160,569,526(+) A/G intron_variant
rs1000327495 -- 160,553,730(+) C/T intron_variant
rs1000475171 -- 160,564,180(+) C/T intron_variant
rs1000479310 -- 160,545,793(+) C/G/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371468 Gene

Disorders for LOC105371468 Gene

No disorders were found for LOC105371468 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371468 Gene

Publications for LOC105371468 Gene

No publications were found for LOC105371468 Gene.

No data available for External Links for LOC105371468 Gene

Products for LOC105371468 Gene

Sources for LOC105371468 Gene

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