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Aliases for LOC105371467 Gene

Subcategory (RNA class) for LOC105371467 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371467 Gene

  • Uncharacterized LOC105371467 3

External Ids for LOC105371467 Gene

Previous GeneCards Identifiers for LOC105371467 Gene

  • GC01U904361

Summaries for LOC105371467 Gene

GeneCards Summary for LOC105371467 Gene

LOC105371467 (Uncharacterized LOC105371467) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371467 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371467 Gene

Genomics for LOC105371467 Gene

GeneHancer (GH) Regulatory Elements for LOC105371467 Gene

Promoters and enhancers for LOC105371467 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J160436 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 600.7 +0.1 116 2.5 SP1 ZNF687 BACH1 CREM ZNF639 IKZF1 IKZF2 PKNOX1 RUNX3 NFIC LOC105371467 SLAMF6 USP21 SLAMF1 PPOX CD84 VANGL2 ENSG00000228863 ITLN1 LY9
GH01J160426 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +7.8 7776 8 SP1 CC2D1A CTCF NKRF ZNF687 JUND RELA CREM RAD21 ZBED1 VANGL2 SLAMF7 USP21 SLAMF1 NCSTN ENSG00000228863 NHLH1 ITLN1 CD48 CD244
GH01J160518 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.2 -83.1 -83118 4.7 CC2D1A ZKSCAN8 CBFA2T2 ZNF148 NKRF ZNF687 NFIB TRIM24 MLLT1 IKZF1 SLAMF6 VANGL2 CD84 SLAMF1 LOC105371467
GH01J160469 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -34.5 -34524 5.4 CREM IKZF1 IKZF2 CBFB EED RUNX3 ZNF623 JUNB BCOR EBF1 SLAMF1 VANGL2 LOC105371467 SLAMF6
GH01J160443 Enhancer 0.8 Ensembl dbSUPER 0.4 -5.6 -5623 2.4 ZBED1 PKNOX1 ZNF316 RUNX3 BMI1 NBN MAFK ATF7 ZMYM3 TARDBP NHLH1 RNU4-42P SLAMF6 SLAMF1 ENSG00000228863 ITLN1 NCSTN VANGL2 LOC105371467
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371467 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371467 Gene

Genomic Locations for LOC105371467 Gene
chr1:160,432,865-160,438,177
(GRCh38/hg38)
Size:
5,313 bases
Orientation:
Minus strand

Genomic View for LOC105371467 Gene

Genes around LOC105371467 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371467 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371467 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371467 Gene

Proteins for LOC105371467 Gene

Post-translational modifications for LOC105371467 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371467 Gene

Domains & Families for LOC105371467 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371467 Gene

Function for LOC105371467 Gene

Phenotypes From GWAS Catalog for LOC105371467 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371467 Gene

Localization for LOC105371467 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371467 Gene

Pathways & Interactions for LOC105371467 Gene

PathCards logo

SuperPathways for LOC105371467 Gene

No Data Available

Interacting Proteins for LOC105371467 Gene

Gene Ontology (GO) - Biological Process for LOC105371467 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371467 Gene

Drugs & Compounds for LOC105371467 Gene

No Compound Related Data Available

Transcripts for LOC105371467 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371467 Gene

No ASD Table

Relevant External Links for LOC105371467 Gene

GeneLoc Exon Structure for
LOC105371467

No data available for mRNA/cDNA for LOC105371467 Gene

Expression for LOC105371467 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371467 Gene

Orthologs for LOC105371467 Gene

No data available for Orthologs and Evolution for LOC105371467 Gene

Paralogs for LOC105371467 Gene

No data available for Paralogs for LOC105371467 Gene

Variants for LOC105371467 Gene

Sequence variations from dbSNP and Humsavar for LOC105371467 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000188690 -- 160,435,266(-) C/T intron_variant
rs1000647609 -- 160,438,188(-) G/C upstream_transcript_variant
rs1001193026 -- 160,433,974(-) C/T intron_variant
rs1002404453 -- 160,440,162(-) G/T upstream_transcript_variant
rs1002416528 -- 160,433,782(-) T/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371467 Gene

Disorders for LOC105371467 Gene

No disorders were found for LOC105371467 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371467 Gene

Publications for LOC105371467 Gene

No publications were found for LOC105371467 Gene.

No data available for External Links for LOC105371467 Gene

Products for LOC105371467 Gene

Sources for LOC105371467 Gene

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