Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105371466 Gene

Subcategory (RNA class) for LOC105371466 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371466 Gene

  • Uncharacterized LOC105371466 3

External Ids for LOC105371466 Gene

Previous GeneCards Identifiers for LOC105371466 Gene

  • GC01U904386

Summaries for LOC105371466 Gene

GeneCards Summary for LOC105371466 Gene

LOC105371466 (Uncharacterized LOC105371466) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371466 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371466 Gene

Genomics for LOC105371466 Gene

GeneHancer (GH) Regulatory Elements for LOC105371466 Gene

Promoters and enhancers for LOC105371466 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J160407 Enhancer 1 FANTOM5 ENCODE 600.7 -1.2 -1163 4.3 ZNF473 ZNF121 KLF14 ZNF547 GLIS2 RFX1 ZNF600 PRDM10 ZNF629 ZNF692 LOC105371466 NCSTN LOC729867 ENSG00000215840 COPA VANGL2 IGSF9 LOC105371467
GH01J160399 Promoter/Enhancer 1.5 Ensembl ENCODE 0.4 +7.4 7429 3.2 ZFX ZNF148 ZNF687 BACH1 ZBTB7A YY1 SP7 KLF14 CREM PRDM1 VANGL2 NCSTN SLAMF1 IGSF8 LOC105371466
GH01J160426 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -22.0 -21957 8 SP1 CC2D1A CTCF NKRF ZNF687 JUND RELA CREM RAD21 ZBED1 VANGL2 SLAMF7 USP21 SLAMF1 NCSTN ENSG00000228863 NHLH1 ITLN1 CD48 CD244
GH01J160374 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.3 +32.8 32835 2.3 ELF3 CC2D1A CTCF ZNF148 BACH1 PRDM1 ZNF639 RAD21 IKZF1 ARID2 NCSTN KCNJ10 COPA RNU4-42P GC01P160354 LOC105371466
GH01J160436 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 0.3 -29.6 -29617 2.5 SP1 ZNF687 BACH1 CREM ZNF639 IKZF1 IKZF2 PKNOX1 RUNX3 NFIC LOC105371467 SLAMF6 USP21 SLAMF1 PPOX CD84 VANGL2 ENSG00000228863 ITLN1 LY9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371466 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371466 Gene

Genomic Locations for LOC105371466 Gene
chr1:160,375,506-160,408,444
(GRCh38/hg38)
Size:
32,939 bases
Orientation:
Minus strand

Genomic View for LOC105371466 Gene

Genes around LOC105371466 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371466 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371466 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371466 Gene

Proteins for LOC105371466 Gene

Post-translational modifications for LOC105371466 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371466 Gene

Domains & Families for LOC105371466 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371466 Gene

Function for LOC105371466 Gene

Phenotypes From GWAS Catalog for LOC105371466 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371466 Gene

Localization for LOC105371466 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371466 Gene

Pathways & Interactions for LOC105371466 Gene

PathCards logo

SuperPathways for LOC105371466 Gene

No Data Available

Interacting Proteins for LOC105371466 Gene

Gene Ontology (GO) - Biological Process for LOC105371466 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371466 Gene

Drugs & Compounds for LOC105371466 Gene

No Compound Related Data Available

Transcripts for LOC105371466 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371466 Gene

No ASD Table

Relevant External Links for LOC105371466 Gene

GeneLoc Exon Structure for
LOC105371466

No data available for mRNA/cDNA for LOC105371466 Gene

Expression for LOC105371466 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371466 Gene

Orthologs for LOC105371466 Gene

No data available for Orthologs and Evolution for LOC105371466 Gene

Paralogs for LOC105371466 Gene

No data available for Paralogs for LOC105371466 Gene

Variants for LOC105371466 Gene

Sequence variations from dbSNP and Humsavar for LOC105371466 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000087397 -- 160,398,760(-) C/G genic_downstream_transcript_variant, intron_variant
rs1000129560 -- 160,395,160(-) G/A genic_downstream_transcript_variant, intron_variant
rs1000224564 -- 160,395,528(-) C/T genic_downstream_transcript_variant, intron_variant
rs1000254338 -- 160,392,027(-) A/C genic_downstream_transcript_variant, intron_variant
rs1000326657 -- 160,388,799(-) A/C genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371466 Gene

Disorders for LOC105371466 Gene

No disorders were found for LOC105371466 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371466 Gene

Publications for LOC105371466 Gene

No publications were found for LOC105371466 Gene.

No data available for External Links for LOC105371466 Gene

Products for LOC105371466 Gene

Sources for LOC105371466 Gene

Content
Loading form....