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Aliases for LOC105371460 Gene

Subcategory (RNA class) for LOC105371460 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371460 Gene

  • Uncharacterized LOC105371460 3

External Ids for LOC105371460 Gene

Previous GeneCards Identifiers for LOC105371460 Gene

  • GC01U904346

Summaries for LOC105371460 Gene

GeneCards Summary for LOC105371460 Gene

LOC105371460 (Uncharacterized LOC105371460) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371460 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371460 Gene

Genomics for LOC105371460 Gene

GeneHancer (GH) Regulatory Elements for LOC105371460 Gene

Promoters and enhancers for LOC105371460 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J158140 Enhancer 0.3 Ensembl 600.7 +0.3 276 0.8 SCRT2 LOC105371460 KIRREL1 LINC01704
GH01J158148 Promoter/Enhancer 1.4 Ensembl ENCODE 0.4 +8.9 8867 2.4 ZNF652 SIX5 ELF1 SP1 POLR2A HMG20B RXRA IKZF1 NRF1 PRDM10 CD1D ELL2P1 LINC01704 LOC105371460
GH01J158144 Enhancer 0.9 FANTOM5 ENCODE 0.4 +5.7 5740 3.4 CBFA2T2 SMARCA4 IKZF1 PRDM10 PKNOX1 EP300 CEBPB JUN SP1 NFE2 LINC01704 CD1D ELL2P1 KIRREL1 OR10R2 OR10X1 LOC105371460
GH01J158124 Enhancer 0.9 Ensembl ENCODE 0.4 -16.0 -16024 1.4 SP1 CTCF ZSCAN21 RAD21 ARID2 ZNF143 REST TRIM22 GATAD2B SCRT2 KIRREL1 LINC01704 LOC105371460 KIRREL1-IT1
GH01J158101 Enhancer 1 Ensembl ENCODE 0.3 -37.7 -37724 10.8 NFIB ZSCAN21 SP7 PRDM1 ZNF600 ZEB2 ZNF639 ZNF629 ZNF692 ZNF10 KIRREL1 LOC105371460 KIRREL1-IT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371460 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371460 Gene

Genomic Locations for LOC105371460 Gene
chr1:158,140,725-158,170,029
(GRCh38/hg38)
Size:
29,305 bases
Orientation:
Plus strand

Genomic View for LOC105371460 Gene

Genes around LOC105371460 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371460 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371460 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371460 Gene

Proteins for LOC105371460 Gene

Post-translational modifications for LOC105371460 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371460 Gene

Domains & Families for LOC105371460 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371460 Gene

Function for LOC105371460 Gene

Phenotypes From GWAS Catalog for LOC105371460 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371460 Gene

Localization for LOC105371460 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371460 Gene

Pathways & Interactions for LOC105371460 Gene

PathCards logo

SuperPathways for LOC105371460 Gene

No Data Available

Interacting Proteins for LOC105371460 Gene

Gene Ontology (GO) - Biological Process for LOC105371460 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371460 Gene

Drugs & Compounds for LOC105371460 Gene

No Compound Related Data Available

Transcripts for LOC105371460 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371460 Gene

No ASD Table

Relevant External Links for LOC105371460 Gene

GeneLoc Exon Structure for
LOC105371460

No data available for mRNA/cDNA for LOC105371460 Gene

Expression for LOC105371460 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371460 Gene

Orthologs for LOC105371460 Gene

No data available for Orthologs and Evolution for LOC105371460 Gene

Paralogs for LOC105371460 Gene

No data available for Paralogs for LOC105371460 Gene

Variants for LOC105371460 Gene

Sequence variations from dbSNP and Humsavar for LOC105371460 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000028388 -- 158,145,886(+) G/A intron_variant
rs1000080746 -- 158,166,067(+) A/T intron_variant
rs1000375966 -- 158,152,616(+) G/A intron_variant
rs1000432651 -- 158,157,982(+) C/T intron_variant
rs1000556915 -- 158,146,409(+) C/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371460 Gene

Disorders for LOC105371460 Gene

No disorders were found for LOC105371460 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371460 Gene

Publications for LOC105371460 Gene

No publications were found for LOC105371460 Gene.

No data available for External Links for LOC105371460 Gene

Products for LOC105371460 Gene

Sources for LOC105371460 Gene

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