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Aliases for LOC105371433 Gene

Subcategory (RNA class) for LOC105371433 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371433 Gene

  • Uncharacterized LOC105371433 3

External Ids for LOC105371433 Gene

Previous GeneCards Identifiers for LOC105371433 Gene

  • GC01U904261

Summaries for LOC105371433 Gene

GeneCards Summary for LOC105371433 Gene

LOC105371433 (Uncharacterized LOC105371433) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371433 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371433 Gene

Genomics for LOC105371433 Gene

GeneHancer (GH) Regulatory Elements for LOC105371433 Gene

Promoters and enhancers for LOC105371433 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J150156 Promoter/Enhancer 2.1 FANTOM5 Ensembl ENCODE dbSUPER 600.7 +1.2 1204 10.3 HDGF SP1 CC2D1A CTCF CBFA2T2 ZNF148 NKRF GTF2F1 ZNF687 BACH1 LOC105371433 PLEKHO1 SV2A MTMR11 CA14 MCL1 PRPF3 MRPS21 ANP32E RPRD2
GH01J150148 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 0.4 -8.5 -8461 8.1 ZNF148 NKRF POLR2A ZNF687 SP7 CREM PRDM1 MLLT1 EGR1 ZBED1 PLEKHO1 RPRD2 SEMA6C MTMR11 ENSG00000234232 LOC105371433 GC01P150114
GH01J150171 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +10.4 10405 5.5 CC2D1A CTCF CBFA2T2 NFIB SP7 PRDM1 MZF1 RAD21 SMARCA4 ZNF547 ENSG00000285554 PLEKHO1 MTMR11 RPRD2 LOC105371433
GH01J150177 Enhancer 0.5 ENCODE dbSUPER 0.4 +17.4 17409 1.3 SCRT2 PLEKHO1 HIST2H2BE HIST2H2AC BOLA1 CIART ENSG00000285554 LOC105371433 GC01P150213
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371433 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371433 Gene

Genomic Locations for LOC105371433 Gene
chr1:150,160,728-150,181,331
(GRCh38/hg38)
Size:
20,604 bases
Orientation:
Plus strand

Genomic View for LOC105371433 Gene

Genes around LOC105371433 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371433 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371433 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371433 Gene

Proteins for LOC105371433 Gene

Post-translational modifications for LOC105371433 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371433 Gene

Domains & Families for LOC105371433 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371433 Gene

Function for LOC105371433 Gene

Phenotypes From GWAS Catalog for LOC105371433 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371433 Gene

Localization for LOC105371433 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371433 Gene

Pathways & Interactions for LOC105371433 Gene

PathCards logo

SuperPathways for LOC105371433 Gene

No Data Available

Interacting Proteins for LOC105371433 Gene

Gene Ontology (GO) - Biological Process for LOC105371433 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371433 Gene

Drugs & Compounds for LOC105371433 Gene

No Compound Related Data Available

Transcripts for LOC105371433 Gene

mRNA/cDNA for LOC105371433 Gene

(2) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371433 Gene

No ASD Table

Relevant External Links for LOC105371433 Gene

GeneLoc Exon Structure for
LOC105371433

Expression for LOC105371433 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371433 Gene

Orthologs for LOC105371433 Gene

No data available for Orthologs and Evolution for LOC105371433 Gene

Paralogs for LOC105371433 Gene

No data available for Paralogs for LOC105371433 Gene

Variants for LOC105371433 Gene

Sequence variations from dbSNP and Humsavar for LOC105371433 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000207582 -- 150,164,190(+) C/T intron_variant
rs1000492843 -- 150,168,660(+) A/C intron_variant
rs1000628944 -- 150,168,483(+) G/A intron_variant
rs1000812717 -- 150,163,137(+) C/T intron_variant
rs1001078129 -- 150,163,400(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371433 Gene

Disorders for LOC105371433 Gene

No disorders were found for LOC105371433 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371433 Gene

Publications for LOC105371433 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

No data available for External Links for LOC105371433 Gene

Products for LOC105371433 Gene

Sources for LOC105371433 Gene

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