Aliases for LOC105371414 Gene

Data sources for LOC105371414 Gene:

Subcategory (RNA class) for LOC105371414 Gene

lncRNA

Aliases for LOC105371414 Gene

External Ids for LOC105371414 Gene

Previous GeneCards Identifiers for LOC105371414 Gene

  • GC16U901833
  • GC16P089312
  • GC16P089313
  • GC16P089348
  • GC16P089351
  • GC16P089383
  • GC16P089417

Summaries for LOC105371414 Gene

GeneCards Summary for LOC105371414 Gene

LOC105371414 (Uncharacterized LOC105371414) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with LOC105371414 include Kbg Syndrome.

Additional gene information for LOC105371414 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371414 Gene

Genomics for LOC105371414 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105371414 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371414 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105371414 Gene

Latest Assembly
chr16:89,295,237-89,298,975
(GRCh38/hg38)
Size:
3,739 bases
Orientation:
Plus strand

Previous Assembly
chr16:89,362,536-89,364,725
(GRCh37/hg19 by Entrez Gene)
Size:
2,190 bases
Orientation:
Plus strand

chr16:89,363,916-89,364,724
(GRCh37/hg19 by Ensembl)
Size:
809 bases
Orientation:
Plus strand

Genomic View for LOC105371414 Gene

Genes around LOC105371414 on UCSC Golden Path with GeneCards custom track
LOC105371414 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105371414 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371414 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371414 Gene

Proteins for LOC105371414 Gene

Post-translational modifications for LOC105371414 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371414 Gene

Domains & Families for LOC105371414 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371414 Gene

Function for LOC105371414 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371414 Gene

Localization for LOC105371414 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371414 Gene

Pathways & Interactions for LOC105371414 Gene

PathCards logo

SuperPathways for LOC105371414 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105371414 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105371414 Gene

Drugs & Compounds for LOC105371414 Gene

No Compound Related Data Available

Transcripts for LOC105371414 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC105371414 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000768E78_9606 lncRNA 412 3

Ensembl: ENST00000563087 (view in UCSC) ,

LncBook: HSALNT0235462,

LNCipedia: lnc-ZNF778-1:7,

URS0000A775BB_9606 lncRNA 1576 2

RefSeq: NR_136339,

LNCipedia: lnc-ZNF778-1:5,

URS0000DBB17F_9606 lncRNA 1575 1

Ensembl: ENST00000564394 (view in UCSC) ,

URS0000EEE1FE_9606 lncRNA 1209 1

Ensembl: ENST00000671638 (view in UCSC) ,

URS00005BA540_9606 lncRNA 273 3

LncBook: HSALNT0235464,

LNCipedia: lnc-ZNF778-1:8,

NONCODE: NONHSAT144513.2,

LOC105371414 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC105371414 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371414 Gene

No ASD Table

Relevant External Links for LOC105371414 Gene

GeneLoc Exon Structure for
LOC105371414

Expression for LOC105371414 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371414 Gene

Orthologs for LOC105371414 Gene

Evolution for LOC105371414 Gene

ENSEMBL:
Gene Tree for LOC105371414 (if available)
TreeFam:
Gene Tree for LOC105371414 (if available)

No data available for Orthologs for LOC105371414 Gene

Paralogs for LOC105371414 Gene

No data available for Paralogs for LOC105371414 Gene

Variants for LOC105371414 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105371414 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Variation tolerance for LOC105371414 Gene

Gene Damage Index Score: 0.10; 2.36% of all genes are more intolerant (likely to be disease-causing)

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Additional Variant Information for LOC105371414 Gene

Disorders for LOC105371414 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LOC105371414 Gene - From: CVR

Disorder Aliases PubMed IDs
kbg syndrome
  • kbgs
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for LOC105371414

Open Targets Platform
Open Targets Platform
genes like me logo Genes that share disorders with LOC105371414: view

No data available for UniProtKB/Swiss-Prot and Genatlas for LOC105371414 Gene

Publications for LOC105371414 Gene

  1. [IMAGE: molecular integration of the analysis of the human genome and its expression]. (PMID: 7757816) Auffray C … Lamy B (Comptes rendus de l'Academie des sciences. Serie III, Sciences de la vie 1995) 3

No data available for Mastermind for LOC105371414 Gene

Products for LOC105371414 Gene

Sources for LOC105371414 Gene