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Aliases for LOC105371414 Gene

Subcategory (RNA class) for LOC105371414 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371414 Gene

  • Uncharacterized LOC105371414 3

External Ids for LOC105371414 Gene

Previous GeneCards Identifiers for LOC105371414 Gene

  • GC16U901833
  • GC16P089312
  • GC16P089313

Summaries for LOC105371414 Gene

GeneCards Summary for LOC105371414 Gene

LOC105371414 (Uncharacterized LOC105371414) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371414 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371414 Gene

Genomics for LOC105371414 Gene

GeneHancer (GH) Regulatory Elements for LOC105371414 Gene

Promoters and enhancers for LOC105371414 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J089298 Enhancer 0.6 ENCODE dbSUPER 600.7 +1.2 1243 0.2 RFX1 BMI1 MXD4 ENSG00000260279 LOC105371414 LOC100287036 ANKRD11
GH16J089296 Enhancer 0.4 dbSUPER 600.7 +0.8 807 0.5 RFX1 MXD4 LOC105371414 ENSG00000260279 RNU6-430P LOC100287036 ANKRD11
GH16J089290 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 0.7 -3.5 -3470 4.1 SP1 ZNF600 ZNF692 POLR2A MBD2 KLF8 ZFP69B WT1 CTCF SNIP1 ACSF3 ANKRD11 ZC3H18 ZNF778 GALNS RNU6-430P ENSG00000268218 TCF25 SNORD68 ENSG00000261118
GH16J089297 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 +4.7 4719 6.8 ZNF652 CEBPG MAFK GLIS2 RFX1 ZBTB33 ZNF600 CEBPA ZSCAN4 REST LINC00304 TUBB3 ACSF3 ENSG00000260279 ANKRD11 RPL13 ENSG00000259877 CPNE7 LOC105371414 LOC100287036
GH16J089288 Enhancer 1.1 ENCODE dbSUPER 0.4 -6.6 -6614 1.2 SP1 ELF3 CTCF ZNF121 AHR MYC PPARG RAD21 KAT8 GATAD2A ENSG00000260279 GC16M089284 LOC105371414 ANKRD11
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371414 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371414 Gene

Genomic Locations for LOC105371414 Gene
chr16:89,296,085-89,300,962
(GRCh38/hg38)
Size:
4,878 bases
Orientation:
Plus strand

Genomic View for LOC105371414 Gene

Genes around LOC105371414 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371414 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371414 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371414 Gene

Proteins for LOC105371414 Gene

Post-translational modifications for LOC105371414 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371414 Gene

Domains & Families for LOC105371414 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371414 Gene

Function for LOC105371414 Gene

Phenotypes From GWAS Catalog for LOC105371414 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371414 Gene

Localization for LOC105371414 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371414 Gene

Pathways & Interactions for LOC105371414 Gene

PathCards logo

SuperPathways for LOC105371414 Gene

No Data Available

Interacting Proteins for LOC105371414 Gene

Gene Ontology (GO) - Biological Process for LOC105371414 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371414 Gene

Drugs & Compounds for LOC105371414 Gene

No Compound Related Data Available

Transcripts for LOC105371414 Gene

mRNA/cDNA for LOC105371414 Gene

(2) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371414 Gene

No ASD Table

Relevant External Links for LOC105371414 Gene

GeneLoc Exon Structure for
LOC105371414

Expression for LOC105371414 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371414 Gene

Orthologs for LOC105371414 Gene

No data available for Orthologs and Evolution for LOC105371414 Gene

Paralogs for LOC105371414 Gene

No data available for Paralogs for LOC105371414 Gene

Variants for LOC105371414 Gene

Sequence variations from dbSNP and Humsavar for LOC105371414 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000001336 -- 89,298,371(+) G/A downstream_transcript_variant
rs1000360030 -- 89,297,335(+) G/T non_coding_transcript_variant
rs1000397454 -- 89,296,661(+) C/G non_coding_transcript_variant
rs1000640829 -- 89,298,001(+) A/G intron_variant
rs1000999431 -- 89,297,760(+) G/A/C non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371414 Gene

Disorders for LOC105371414 Gene

No disorders were found for LOC105371414 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371414 Gene

Publications for LOC105371414 Gene

  1. [IMAGE: molecular integration of the analysis of the human genome and its expression]. (PMID: 7757816) Auffray C … Lamy B (Comptes rendus de l'Academie des sciences. Serie III, Sciences de la vie 1995) 3 58

No data available for External Links for LOC105371414 Gene

Products for LOC105371414 Gene

Sources for LOC105371414 Gene

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