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Aliases for LOC105371413 Gene

Subcategory (RNA class) for LOC105371413 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371413 Gene

  • Uncharacterized LOC105371413 3

External Ids for LOC105371413 Gene

Previous GeneCards Identifiers for LOC105371413 Gene

  • GC16U902009

Summaries for LOC105371413 Gene

GeneCards Summary for LOC105371413 Gene

LOC105371413 (Uncharacterized LOC105371413) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371413 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371413 Gene

Genomics for LOC105371413 Gene

GeneHancer (GH) Regulatory Elements for LOC105371413 Gene

Promoters and enhancers for LOC105371413 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J089256 Enhancer 0.6 ENCODE 600.7 +0.0 36 1.4 SP1 POLR2A FOS YY1 GABPA NR2F2 HNF4A MAX SIN3A RXRA LOC105371413 ENSG00000260279 LINC00304 PIR44316
GH16J089246 Enhancer 1.2 FANTOM5 ENCODE 0.4 +9.6 9644 1.5 MNT POLR2A RERE AHR MAFK KAT8 GLIS2 GMEB1 ZIC2 NFKBIZ ENSG00000259877 TRAPPC2L ZNF778 ACSF3 SLC22A31 ZNF276 LOC105371413 PIR44316
GH16J089261 Enhancer 0.8 ENCODE 0.7 -4.8 -4784 1 SP1 SP5 KAT8 PRDM10 NFKBIZ RCOR2 GABPA IRF2 KMT2B SCRT2 ENSG00000259877 LOC105371413 ENSG00000268218
GH16J089240 Enhancer 1.1 ENCODE 0.4 +16.1 16076 2.1 CC2D1A ZFX ELF3 CTCF MNT SIX5 ZNF148 NKRF POLR2A MLLT1 ANKRD11 AFG3L1P ENSG00000268218 ZC3H18 MC1R ENSG00000259877 ACSF3 TCF25 SPG7 ENSG00000261118
GH16J089233 Enhancer 0.4 Ensembl 0.3 +22.8 22792 2.4 PRDM1 FOS PIR44316 ENSG00000259877 CDK10 SLC22A31 CDH15 LOC105371413 ZNF778
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371413 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371413 Gene

Genomic Locations for LOC105371413 Gene
chr16:89,254,591-89,257,193
(GRCh38/hg38)
Size:
2,603 bases
Orientation:
Minus strand

Genomic View for LOC105371413 Gene

Genes around LOC105371413 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371413 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371413 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371413 Gene

Proteins for LOC105371413 Gene

Post-translational modifications for LOC105371413 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371413 Gene

Domains & Families for LOC105371413 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371413 Gene

Function for LOC105371413 Gene

Phenotypes From GWAS Catalog for LOC105371413 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371413 Gene

Localization for LOC105371413 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371413 Gene

Pathways & Interactions for LOC105371413 Gene

PathCards logo

SuperPathways for LOC105371413 Gene

No Data Available

Interacting Proteins for LOC105371413 Gene

Gene Ontology (GO) - Biological Process for LOC105371413 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371413 Gene

Drugs & Compounds for LOC105371413 Gene

No Compound Related Data Available

Transcripts for LOC105371413 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371413 Gene

No ASD Table

Relevant External Links for LOC105371413 Gene

GeneLoc Exon Structure for
LOC105371413

No data available for mRNA/cDNA for LOC105371413 Gene

Expression for LOC105371413 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371413 Gene

Orthologs for LOC105371413 Gene

No data available for Orthologs and Evolution for LOC105371413 Gene

Paralogs for LOC105371413 Gene

No data available for Paralogs for LOC105371413 Gene

Variants for LOC105371413 Gene

Sequence variations from dbSNP and Humsavar for LOC105371413 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000744078 -- 89,255,384(-) G/A intron_variant
rs1001002839 -- 89,258,200(-) A/G non_coding_transcript_variant
rs1001365129 -- 89,255,272(-) G/C intron_variant
rs1001885005 -- 89,257,584(-) A/C non_coding_transcript_variant
rs1002434614 -- 89,258,772(-) G/A/C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371413 Gene

Disorders for LOC105371413 Gene

No disorders were found for LOC105371413 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371413 Gene

Publications for LOC105371413 Gene

No publications were found for LOC105371413 Gene.

No data available for External Links for LOC105371413 Gene

Products for LOC105371413 Gene

Sources for LOC105371413 Gene

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