LOC105371412 Gene (RNA Gene)

Uncharacterized LOC105371412

GC16P089071
GIFtS:
2
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Aliases for LOC105371412 Gene

Data sources for LOC105371412 Gene:

Subcategory (RNA class) for LOC105371412 Gene

ncRNA

Aliases for LOC105371412 Gene

External Ids for LOC105371412 Gene

Previous GeneCards Identifiers for LOC105371412 Gene

  • GC16U902172

Summaries for LOC105371412 Gene

GeneCards Summary for LOC105371412 Gene

LOC105371412 (Uncharacterized LOC105371412) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371412 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371412 Gene

Genomics for LOC105371412 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LOC105371412 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH16J089071 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 +1.1 1058 1.4 REST ELF1 ESRRA ZMYM3 GATA2 POLR2A CTCF CHD2 BCOR SMARCA5 LOC105371412 ACSF3 CBFA2T3
GH16J089067 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.7 -3.1 -3138 0.6 ZIC2 CEBPB EBF1 NRF1 GLIS1 NFIB CREB1 GLIS2 HSALNG0113573 LOC105371412 ACSF3 CBFA2T3
GH16J089066 Enhancer 0.9 FANTOM5 Ensembl ENCODE 0.4 -5.5 -5538 0.6 EBF1 BHLHE40 ELF1 IKZF1 SPI1 ZNF692 EGR2 MTA2 DPF2 GATAD2B HSALNG0113573 LOC105371411 ENSG00000256982 HSALNG0113575 LOC105371412 ACSF3 CBFA2T3
GH16J089084 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +13.3 13261 2.2 ZNF341 HNRNPL HIC1 EP300 ACSF3 SLC22A31 CDK10 CDH15 LOC105371412 CBFA2T3
GH16J089079 Enhancer 0.5 ENCODE 0.4 +9.3 9318 0.9 JUND ATF2 CREB1 MNT ATF7 SLC22A31 ACSF3 LOC105371412 CBFA2T3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371412 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105371412 Gene

Latest Assembly
chr16:89,071,039-89,073,422
(GRCh38/hg38)
Size:
2,384 bases
Orientation:
Plus strand

Genomic View for LOC105371412 Gene

Genes around LOC105371412 on UCSC Golden Path with GeneCards custom track
LOC105371412 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105371412 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371412 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC105371412 Gene

Proteins for LOC105371412 Gene

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  2. Protein products for research
  3. Assay products for research

Post-translational modifications for LOC105371412 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371412 Gene

Domains & Families for LOC105371412 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371412 Gene

Function for LOC105371412 Gene

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  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371412 Gene

Localization for LOC105371412 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371412 Gene

Pathways & Interactions for LOC105371412 Gene

PathCards logo

SuperPathways for LOC105371412 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105371412 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105371412 Gene

Drugs & Compounds for LOC105371412 Gene

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  1. Drug products for research
No Compound Related Data Available

Transcripts for LOC105371412 Gene

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  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research
LOC105371412 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371412 Gene

No ASD Table

Relevant External Links for LOC105371412 Gene

GeneLoc Exon Structure for
LOC105371412

No data available for mRNA/cDNA for LOC105371412 Gene

Expression for LOC105371412 Gene

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  1. Primer products for research
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371412 Gene

Orthologs for LOC105371412 Gene

No data available for Orthologs and Evolution for LOC105371412 Gene

Paralogs for LOC105371412 Gene

No data available for Paralogs for LOC105371412 Gene

Variants for LOC105371412 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105371412 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371412 Gene

Disorders for LOC105371412 Gene

No disorders were found for LOC105371412 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371412 Gene

Publications for LOC105371412 Gene

No publications were found for LOC105371412 Gene.

No data available for Mastermind for LOC105371412 Gene

Products for LOC105371412 Gene

Sources for LOC105371412 Gene