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Aliases for LOC105371409 Gene

Aliases for LOC105371409 Gene

  • Cadmium/Zinc-Transporting ATPase HMA2-Like 3

External Ids for LOC105371409 Gene

Previous GeneCards Identifiers for LOC105371409 Gene

  • GC16U902148

Summaries for LOC105371409 Gene

GeneCards Summary for LOC105371409 Gene

LOC105371409 (Cadmium/Zinc-Transporting ATPase HMA2-Like) is a Protein Coding gene.

Additional gene information for LOC105371409 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371409 Gene

Genomics for LOC105371409 Gene

GeneHancer (GH) Regulatory Elements for LOC105371409 Gene

Promoters and enhancers for LOC105371409 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J088920 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 600.7 -0.5 -450 8.9 MTA3 CTCF ELF3 CBFA2T2 NFIB NCOA3 MYC TFE3 SP5 EGR1 LOC105371409 CBFA2T3 APRT SNORD68 ACSF3 RPL13 ANKRD11 LOC100129697 CDK10 LOC102724632
GH16J088935 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 +11.5 11521 2.6 NCOA3 RAD21 CREB1 NRF1 TARDBP CTBP1 GTF2F1 RFX1 EED KLF4 CBFA2T3 LOC100129697 ENSG00000259881 ENSG00000261226 LOC105371409
GH16J088910 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -14.0 -14027 1.6 NFIB RFX1 RFX3 BMI1 PTBP1 NFIC ZFHX2 BCOR CBX1 RFX5 CDK10 LOC102724632 LOC105371409 CBFA2T3
GH16J088905 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -19.3 -19347 2.6 KLF9 BCOR ADNP VEZF1 ZMYM3 CBFA2T3 RNF166 ENSG00000261226 LOC102724632 LOC105371409
GH16J088907 Enhancer 0.8 Ensembl ENCODE 0.4 -17.0 -17046 1.6 FOSL2 CREB1 IKZF1 PKNOX1 ZKSCAN1 DPF2 NFIC FOS ZMYM3 CBFA2T3 LOC102724632 LOC105371409
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371409 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371409 Gene

Genomic Locations for LOC105371409 Gene
chr16:88,925,447-88,930,657
(GRCh38/hg38)
Size:
5,211 bases
Orientation:
Plus strand

Genomic View for LOC105371409 Gene

Genes around LOC105371409 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371409 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371409 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371409 Gene

Proteins for LOC105371409 Gene

Post-translational modifications for LOC105371409 Gene

No Post-translational modifications

Other Protein References for LOC105371409 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC105371409 Gene

Domains & Families for LOC105371409 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371409 Gene

Function for LOC105371409 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371409 Gene

Localization for LOC105371409 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371409 Gene

Pathways & Interactions for LOC105371409 Gene

PathCards logo

SuperPathways for LOC105371409 Gene

No Data Available

Interacting Proteins for LOC105371409 Gene

Gene Ontology (GO) - Biological Process for LOC105371409 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371409 Gene

Drugs & Compounds for LOC105371409 Gene

No Compound Related Data Available

Transcripts for LOC105371409 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371409 Gene

No ASD Table

Relevant External Links for LOC105371409 Gene

GeneLoc Exon Structure for
LOC105371409

No data available for mRNA/cDNA for LOC105371409 Gene

Expression for LOC105371409 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371409 Gene

Orthologs for LOC105371409 Gene

No data available for Orthologs and Evolution for LOC105371409 Gene

Paralogs for LOC105371409 Gene

No data available for Paralogs for LOC105371409 Gene

Variants for LOC105371409 Gene

Sequence variations from dbSNP and Humsavar for LOC105371409 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000173061 -- 88,930,869(+) G/A downstream_transcript_variant
rs1000181784 -- 88,929,189(+) T/G 5_prime_UTR_variant
rs1001680914 -- 88,931,025(+) C/T downstream_transcript_variant
rs1002056483 -- 88,928,305(+) G/A/C upstream_transcript_variant
rs1002108819 -- 88,928,184(+) C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371409 Gene

Disorders for LOC105371409 Gene

No disorders were found for LOC105371409 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371409 Gene

Publications for LOC105371409 Gene

No publications were found for LOC105371409 Gene.

No data available for External Links for LOC105371409 Gene

Products for LOC105371409 Gene

Sources for LOC105371409 Gene

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