Aliases for LOC105371394 Gene

Subcategory (RNA class) for LOC105371394 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371394 Gene

  • Uncharacterized LOC105371394 3

External Ids for LOC105371394 Gene

Previous GeneCards Identifiers for LOC105371394 Gene

  • GC16U902186

Summaries for LOC105371394 Gene

GeneCards Summary for LOC105371394 Gene

LOC105371394 (Uncharacterized LOC105371394) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371394 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371394 Gene

Genomics for LOC105371394 Gene

GeneHancer (GH) Regulatory Elements for LOC105371394 Gene

Promoters and enhancers for LOC105371394 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J087076 Enhancer 0.9 Ensembl ENCODE 0.3 -41.0 -40959 2.4 SP1 CTCF NR2F1 NR2F6 RAD21 MNT KLF14 ZIC2 RXRA REST MTHFSD ENSG00000269901 ENSG00000261363 LOC105371394
GH16J087098 Enhancer 0.5 Ensembl ENCODE CraniofacialAtlas 0.4 -17.9 -17859 1.8 FBXO31 LOC105371394 ENSG00000261363 C16orf95 lnc-C16orf95-2-001
GH16J087110 Enhancer 0.3 Ensembl ENCODE 0.4 -7.4 -7359 1.2 LOC105371394 ENSG00000261363 C16orf95 lnc-C16orf95-2-001
GH16J087075 Enhancer 0.4 ENCODE 0.3 -42.4 -42430 0.2 SP1 ZIC2 IKZF2 RUNX3 ENSG00000261363 LOC105371394
GH16J087093 Enhancer 0.3 Ensembl 0.3 -23.4 -23359 1.2 EZH2 LOC105371394 ENSG00000261363 lnc-C16orf95-2-001 C16orf95
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371394 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371394 Gene

Genomic Locations for LOC105371394 Gene
chr16:87,117,560-87,120,017
(GRCh38/hg38)
Size:
2,458 bases
Orientation:
Plus strand

Genomic View for LOC105371394 Gene

Genes around LOC105371394 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371394 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371394 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371394 Gene

Proteins for LOC105371394 Gene

Post-translational modifications for LOC105371394 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371394 Gene

Domains & Families for LOC105371394 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371394 Gene

Function for LOC105371394 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371394 Gene

Localization for LOC105371394 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371394 Gene

Pathways & Interactions for LOC105371394 Gene

PathCards logo

SuperPathways for LOC105371394 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105371394 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371394 Gene

Drugs & Compounds for LOC105371394 Gene

No Compound Related Data Available

Transcripts for LOC105371394 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371394 Gene

No ASD Table

Relevant External Links for LOC105371394 Gene

GeneLoc Exon Structure for
LOC105371394

No data available for mRNA/cDNA for LOC105371394 Gene

Expression for LOC105371394 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371394 Gene

Orthologs for LOC105371394 Gene

No data available for Orthologs and Evolution for LOC105371394 Gene

Paralogs for LOC105371394 Gene

No data available for Paralogs for LOC105371394 Gene

Variants for LOC105371394 Gene

Sequence variations from dbSNP and Humsavar for LOC105371394 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000297507 -- 87,116,407(+) T/C upstream_transcript_variant
rs1000656017 -- 87,118,787(+) T/C genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1001006898 -- 87,118,580(+) C/G genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1001152242 -- 87,120,328(+) C/G non_coding_transcript_variant
rs1002239490 -- 87,119,279(+) T/G non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371394 Gene

Disorders for LOC105371394 Gene

No disorders were found for LOC105371394 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371394 Gene

Publications for LOC105371394 Gene

No publications were found for LOC105371394 Gene.

No data available for External Links for LOC105371394 Gene

Products for LOC105371394 Gene

Sources for LOC105371394 Gene