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Aliases for LOC105371388 Gene

Subcategory (RNA class) for LOC105371388 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371388 Gene

  • Uncharacterized LOC105371388 3

External Ids for LOC105371388 Gene

Previous GeneCards Identifiers for LOC105371388 Gene

  • GC16U901966

Summaries for LOC105371388 Gene

GeneCards Summary for LOC105371388 Gene

LOC105371388 (Uncharacterized LOC105371388) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371388 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371388 Gene

Genomics for LOC105371388 Gene

GeneHancer (GH) Regulatory Elements for LOC105371388 Gene

Promoters and enhancers for LOC105371388 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J085923 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 600.7 -1.8 -1839 2.3 ZBED1 RXRA POLR2A LARP7 SMAD5 SP1 JUND BCLAF1 FOS NR2F2 ENSG00000285163 LOC105371388 IRF8 COX4I1 EMC8 MIR6774
GH16J085934 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +10.2 10203 2.9 SP1 NKRF ZNF687 MAFK RELA CREM MLLT1 ZBED1 IKZF1 POLR2A LINC02132 IRF8 COX4I1 EMC8 ENSG00000270124 ENSG00000285163 LOC105371388
GH16J085927 Enhancer 0.8 ENCODE dbSUPER 0.7 +2.3 2319 1.7 ZIC2 CEBPA SP1 ZBTB17 ZFHX2 RAD21 TFAP4 HNF4A CEBPB EZH2 IRF8 LOC105371388 ENSG00000285163 LINC02132
GH16J085944 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 0.3 +20.9 20855 4.5 NKRF ZNF687 RELA SP1 CREM MLLT1 ZBED1 IKZF1 RXRA BACH1 IRF8 FOXL1 LINC02132 ENSG00000285163 LOC105371388 PIR52537
GH16J085940 Enhancer 0.9 ENCODE dbSUPER 0.4 +14.4 14440 0.3 SP1 HNF1A CREB1 RXRA FOXA2 JUND ATF3 YY1 GABPA RAD21 IRF8 LINC02132 LOC105371388 ENSG00000285163 PIR52537
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371388 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371388 Gene

Genomic Locations for LOC105371388 Gene
chr16:85,926,020-85,949,182
(GRCh38/hg38)
Size:
23,163 bases
Orientation:
Plus strand

Genomic View for LOC105371388 Gene

Genes around LOC105371388 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371388 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371388 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371388 Gene

Proteins for LOC105371388 Gene

Post-translational modifications for LOC105371388 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371388 Gene

Domains & Families for LOC105371388 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371388 Gene

Function for LOC105371388 Gene

Phenotypes From GWAS Catalog for LOC105371388 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371388 Gene

Localization for LOC105371388 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371388 Gene

Pathways & Interactions for LOC105371388 Gene

PathCards logo

SuperPathways for LOC105371388 Gene

No Data Available

Interacting Proteins for LOC105371388 Gene

Gene Ontology (GO) - Biological Process for LOC105371388 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371388 Gene

Drugs & Compounds for LOC105371388 Gene

No Compound Related Data Available

Transcripts for LOC105371388 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371388 Gene

No ASD Table

Relevant External Links for LOC105371388 Gene

GeneLoc Exon Structure for
LOC105371388

No data available for mRNA/cDNA for LOC105371388 Gene

Expression for LOC105371388 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371388 Gene

Orthologs for LOC105371388 Gene

No data available for Orthologs and Evolution for LOC105371388 Gene

Paralogs for LOC105371388 Gene

No data available for Paralogs for LOC105371388 Gene

Variants for LOC105371388 Gene

Sequence variations from dbSNP and Humsavar for LOC105371388 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000092147 -- 85,948,293(+) G/A intron_variant
rs1000123519 -- 85,948,104(+) G/A/C non_coding_transcript_variant
rs1000412713 -- 85,947,658(+) T/G intron_variant
rs1000465005 -- 85,947,425(+) G/A intron_variant
rs1000757404 -- 85,948,382(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371388 Gene

Disorders for LOC105371388 Gene

No disorders were found for LOC105371388 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371388 Gene

Publications for LOC105371388 Gene

No publications were found for LOC105371388 Gene.

No data available for External Links for LOC105371388 Gene

Products for LOC105371388 Gene

Sources for LOC105371388 Gene

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