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Aliases for LOC105371381 Gene

Subcategory (RNA class) for LOC105371381 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371381 Gene

  • Uncharacterized LOC105371381 3

External Ids for LOC105371381 Gene

Previous GeneCards Identifiers for LOC105371381 Gene

  • GC16U901941

Summaries for LOC105371381 Gene

GeneCards Summary for LOC105371381 Gene

LOC105371381 (Uncharacterized LOC105371381) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371381 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371381 Gene

Genomics for LOC105371381 Gene

GeneHancer (GH) Regulatory Elements for LOC105371381 Gene

Promoters and enhancers for LOC105371381 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J085123 Enhancer 1.1 ENCODE dbSUPER 600.7 -1.4 -1385 4.4 CDC5L BACH1 MAFK SP7 TRIM24 PRDM1 EGR1 MTA1 IKZF1 GLIS2 LOC105371381 ENSG00000261243 ENSG00000270184 FAM92B MEAK7 TAF1C LINC02139
GH16J085134 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 0.4 -12.5 -12455 3.7 ZNF652 SP1 ELF3 MLLT1 ZNF121 CEBPG RERE GTF2F1 AHR MCM2 LINC02139 TAF1C ENSG00000261243 KLHL36 RN7SL381P ENSG00000260859 ENSG00000270184 ZDHHC7 RNU1-103P CRISPLD2
GH16J085114 Enhancer 1.2 ENCODE dbSUPER 0.4 +9.1 9101 1.1 CC2D1A CTCF ELF3 ZNF148 MLLT1 ZNF121 ZNF384 ZNF687 AHR TFE3 TAF1C RNU1-103P KLHL36 ENSG00000261243 ENSG00000270184 FAM92B LOC105371381
GH16J085112 Promoter/Enhancer 1.3 EPDnew Ensembl ENCODE 0.4 +11.5 11464 0.6 GLIS2 ZIC2 RFX1 ZFX RFX3 EGR1 BMI1 ZFHX2 SIN3A ZNF335 FAM92B LOC105371381
GH16J085128 Enhancer 0.6 Ensembl 0.7 -4.6 -4637 0.8 SAP130 BCOR ADNP SMAD4 RARA KDM1A ZMYM3 NR2F6 NR2F1 CBFA2T3 FAM92B LOC105371381 LINC02139
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371381 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371381 Gene

Genomic Locations for LOC105371381 Gene
chr16:85,119,962-85,124,164
(GRCh38/hg38)
Size:
4,203 bases
Orientation:
Minus strand

Genomic View for LOC105371381 Gene

Genes around LOC105371381 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371381 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371381 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371381 Gene

Proteins for LOC105371381 Gene

Post-translational modifications for LOC105371381 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371381 Gene

Domains & Families for LOC105371381 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371381 Gene

Function for LOC105371381 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371381 Gene

Localization for LOC105371381 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371381 Gene

Pathways & Interactions for LOC105371381 Gene

PathCards logo

SuperPathways for LOC105371381 Gene

No Data Available

Interacting Proteins for LOC105371381 Gene

Gene Ontology (GO) - Biological Process for LOC105371381 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371381 Gene

Drugs & Compounds for LOC105371381 Gene

No Compound Related Data Available

Transcripts for LOC105371381 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371381 Gene

No ASD Table

Relevant External Links for LOC105371381 Gene

GeneLoc Exon Structure for
LOC105371381

No data available for mRNA/cDNA for LOC105371381 Gene

Expression for LOC105371381 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371381 Gene

Orthologs for LOC105371381 Gene

No data available for Orthologs and Evolution for LOC105371381 Gene

Paralogs for LOC105371381 Gene

No data available for Paralogs for LOC105371381 Gene

Variants for LOC105371381 Gene

Sequence variations from dbSNP and Humsavar for LOC105371381 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000046013 -- 85,125,571(-) A/T upstream_transcript_variant
rs1000333519 -- 85,125,346(-) G/A/C upstream_transcript_variant
rs1000508653 -- 85,122,492(-) G/T intron_variant
rs1000962519 -- 85,124,783(-) G/A upstream_transcript_variant
rs1001062362 -- 85,122,331(-) A/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371381 Gene

Disorders for LOC105371381 Gene

No disorders were found for LOC105371381 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371381 Gene

Publications for LOC105371381 Gene

No publications were found for LOC105371381 Gene.

No data available for External Links for LOC105371381 Gene

Products for LOC105371381 Gene

Sources for LOC105371381 Gene

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