Aliases for LOC105371380 Gene

Subcategory (RNA class) for LOC105371380 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371380 Gene

  • Uncharacterized LOC105371380 3

External Ids for LOC105371380 Gene

Previous GeneCards Identifiers for LOC105371380 Gene

  • GC16U902255

Summaries for LOC105371380 Gene

GeneCards Summary for LOC105371380 Gene

LOC105371380 (Uncharacterized LOC105371380) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371380 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371380 Gene

Genomics for LOC105371380 Gene

GeneHancer (GH) Regulatory Elements for LOC105371380 Gene

Promoters and enhancers for LOC105371380 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J085081 Enhancer 1 Ensembl ENCODE CraniofacialAtlas 750.6 +1.7 1722 3.2 POU5F1 SP1 IKZF1 IKZF2 POLR2A MNT EZH2 DPF2 EED RUNX3 LOC105371380 HSALNG0113185 ZDHHC7 KIAA0513 lnc-FAM92B-4
GH16J085085 Enhancer 0.3 Ensembl 750.6 -1.2 -1201 0.6 EBF1 LOC105371380 KIAA0513 piR-31352
GH16J085086 Enhancer 0.8 ENCODE 0.6 -3.1 -3066 0.9 CTCF RBPJ MIXL1 MYC CC2D1A MAX RAD21 ELF3 SP7 GLIS2 piR-31352 KLHL36 ENSG00000261243 ENSG00000260859 RN7SL381P KIAA0513 ZDHHC7 LOC105371380
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371380 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371380 Gene

Genomic Locations for LOC105371380 Gene
chr16:85,079,345-85,084,100
(GRCh38/hg38)
Size:
4,756 bases
Orientation:
Minus strand

Genomic View for LOC105371380 Gene

Genes around LOC105371380 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371380 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371380 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371380 Gene

Proteins for LOC105371380 Gene

Post-translational modifications for LOC105371380 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371380 Gene

Domains & Families for LOC105371380 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371380 Gene

Function for LOC105371380 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371380 Gene

Localization for LOC105371380 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371380 Gene

Pathways & Interactions for LOC105371380 Gene

PathCards logo

SuperPathways for LOC105371380 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105371380 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371380 Gene

Drugs & Compounds for LOC105371380 Gene

No Compound Related Data Available

Transcripts for LOC105371380 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371380 Gene

No ASD Table

Relevant External Links for LOC105371380 Gene

GeneLoc Exon Structure for
LOC105371380

No data available for mRNA/cDNA for LOC105371380 Gene

Expression for LOC105371380 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371380 Gene

Orthologs for LOC105371380 Gene

No data available for Orthologs and Evolution for LOC105371380 Gene

Paralogs for LOC105371380 Gene

No data available for Paralogs for LOC105371380 Gene

Variants for LOC105371380 Gene

Sequence variations from dbSNP and Humsavar for LOC105371380 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000436065 -- 85,079,994(-) C/A/G/T non_coding_transcript_variant
rs1000457352 -- 85,081,520(-) C/T upstream_transcript_variant
rs1001612834 -- 85,080,266(-) T/C non_coding_transcript_variant
rs1001916482 -- 85,080,393(-) T/G intron_variant
rs1002015227 -- 85,081,960(-) C/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371380 Gene

Disorders for LOC105371380 Gene

No disorders were found for LOC105371380 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371380 Gene

Publications for LOC105371380 Gene

No publications were found for LOC105371380 Gene.

No data available for External Links for LOC105371380 Gene

Products for LOC105371380 Gene

Sources for LOC105371380 Gene