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Aliases for LOC105371376 Gene

Subcategory (RNA class) for LOC105371376 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371376 Gene

  • Uncharacterized LOC105371376 3

External Ids for LOC105371376 Gene

Previous GeneCards Identifiers for LOC105371376 Gene

  • GC16U901861

Summaries for LOC105371376 Gene

GeneCards Summary for LOC105371376 Gene

LOC105371376 (Uncharacterized LOC105371376) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371376 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371376 Gene

Genomics for LOC105371376 Gene

GeneHancer (GH) Regulatory Elements for LOC105371376 Gene

Promoters and enhancers for LOC105371376 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J084647 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 600.7 +1.4 1366 4.1 MTA3 ZFX NKRF ZNF687 ZNF24 TRIM24 POLR2A SP1 PPARG SP5 KLHL36 LOC105371376 TAF1C ENSG00000261243 COTL1 USP10 HSDL1
GH16J084652 Enhancer 0.2 ENCODE 600.7 -1.9 -1907 0.2 LOC105371376 COTL1 USP10 KLHL36 GC16P084663
GH16J084640 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 0.4 +8.4 8397 4.6 SP1 ZFX CEBPG ZNF687 MCM2 CREM PRDM1 MLLT1 ZNF639 MTA1 MEAK7 KLHL36 LOC105371376 COTL1
GH16J084648 Enhancer 0.4 Ensembl 0.7 +3.7 3742 0.2 ZC3H11A ZNF781 KLHL36 TAF1C ENSG00000261243 HSDL1 LOC105371376 COTL1
GH16J084655 Enhancer 0.4 Ensembl 0.4 -5.2 -5158 2 PHB2 FOXA1 KLHL36 COTL1 USP10 GC16P084663 LOC105371376
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371376 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371376 Gene

Genomic Locations for LOC105371376 Gene
chr16:84,642,649-84,650,843
(GRCh38/hg38)
Size:
8,195 bases
Orientation:
Minus strand

Genomic View for LOC105371376 Gene

Genes around LOC105371376 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371376 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371376 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371376 Gene

Proteins for LOC105371376 Gene

Post-translational modifications for LOC105371376 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371376 Gene

Domains & Families for LOC105371376 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371376 Gene

Function for LOC105371376 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371376 Gene

Localization for LOC105371376 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371376 Gene

Pathways & Interactions for LOC105371376 Gene

PathCards logo

SuperPathways for LOC105371376 Gene

No Data Available

Interacting Proteins for LOC105371376 Gene

Gene Ontology (GO) - Biological Process for LOC105371376 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371376 Gene

Drugs & Compounds for LOC105371376 Gene

No Compound Related Data Available

Transcripts for LOC105371376 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371376 Gene

No ASD Table

Relevant External Links for LOC105371376 Gene

GeneLoc Exon Structure for
LOC105371376

No data available for mRNA/cDNA for LOC105371376 Gene

Expression for LOC105371376 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371376 Gene

Orthologs for LOC105371376 Gene

No data available for Orthologs and Evolution for LOC105371376 Gene

Paralogs for LOC105371376 Gene

No data available for Paralogs for LOC105371376 Gene

Variants for LOC105371376 Gene

Sequence variations from dbSNP and Humsavar for LOC105371376 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000021408 -- 84,643,922(-) C/G intron_variant
rs1000141679 -- 84,651,694(-) T/C upstream_transcript_variant
rs1000206026 -- 84,645,233(-) C/T intron_variant, non_coding_transcript_variant
rs1000218197 -- 84,649,506(-) G/A genic_upstream_transcript_variant, non_coding_transcript_variant
rs1000807779 -- 84,644,031(-) A/G/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371376 Gene

Disorders for LOC105371376 Gene

No disorders were found for LOC105371376 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371376 Gene

Publications for LOC105371376 Gene

No publications were found for LOC105371376 Gene.

No data available for External Links for LOC105371376 Gene

Products for LOC105371376 Gene

Sources for LOC105371376 Gene

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