Aliases for LOC105371372 Gene

Subcategory (RNA class) for LOC105371372 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LOC105371372 Gene

  • Uncharacterized LOC105371372 3
  • Novel Transcript, Antisense To MLYCD - OSGIN1 Readthrough 5
  • NONHSAG020138.2 91
  • Lnc-SLC38A8-1 165
  • HSALNG0113083 164
  • AC009119.2 5

External Ids for LOC105371372 Gene

Previous GeneCards Identifiers for LOC105371372 Gene

  • GC16U902251

Summaries for LOC105371372 Gene

GeneCards Summary for LOC105371372 Gene

LOC105371372 (Uncharacterized LOC105371372) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105371372 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371372 Gene

Genomics for LOC105371372 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105371372 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J083926 Enhancer 1.1 FANTOM5 ENCODE 0.7 +3.7 3653 2.6 GATAD2A CTCF PRDM10 RCOR2 TARDBP JUND ZNF143 RXRB REST IRF2 MLYCD TAF1C DNAAF1 HSDL1 LOC105371371 LOC105371372 piR-43241
GH16J083925 Promoter 0.3 EPDnew 0.4 +6.1 6066 0.1 MLYCD piR-43241 LOC105371371 LOC105371372
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371372 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105371372 Gene

Genomic Locations for LOC105371372 Gene
chr16:83,927,455-83,931,223
(GRCh38/hg38)
Size:
3,769 bases
Orientation:
Minus strand
chr16:83,963,401-83,964,828
(GRCh37/hg19)
Size:
1,428 bases
Orientation:
Minus strand

Genomic View for LOC105371372 Gene

Genes around LOC105371372 on UCSC Golden Path with GeneCards custom track
LOC105371372 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105371372 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371372 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371372 Gene

Proteins for LOC105371372 Gene

Post-translational modifications for LOC105371372 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371372 Gene

Domains & Families for LOC105371372 Gene

Gene Families for LOC105371372 Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins
genes like me logo Genes that share domains with LOC105371372: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371372 Gene

Function for LOC105371372 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371372 Gene

Localization for LOC105371372 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371372 Gene

Pathways & Interactions for LOC105371372 Gene

PathCards logo

SuperPathways for LOC105371372 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105371372 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105371372 Gene

Drugs & Compounds for LOC105371372 Gene

No Compound Related Data Available

Transcripts for LOC105371372 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC105371372 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000112908_9606 lncRNA 388 4

Ensembl: ENST00000562835 (view in UCSC) ,

LncBook: HSALNT0234439,

LNCipedia: lnc-SLC38A8-1:2,

NONCODE: NONHSAT144023.2,

URS0000445777_9606 lncRNA 196 1

Ensembl: ENST00000566773 (view in UCSC) ,

URS00009B2E5E_9606 lncRNA 512 1

NONCODE: NONHSAT174122.1,

LOC105371372 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371372 Gene

No ASD Table

Relevant External Links for LOC105371372 Gene

GeneLoc Exon Structure for
LOC105371372

No data available for mRNA/cDNA for LOC105371372 Gene

Expression for LOC105371372 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371372 Gene

Orthologs for LOC105371372 Gene

Evolution for LOC105371372 Gene

ENSEMBL:
Gene Tree for LOC105371372 (if available)
TreeFam:
Gene Tree for LOC105371372 (if available)

No data available for Orthologs for LOC105371372 Gene

Paralogs for LOC105371372 Gene

No data available for Paralogs for LOC105371372 Gene

Variants for LOC105371372 Gene

Additional dbSNP identifiers (rs#s) for LOC105371372 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371372 Gene

Disorders for LOC105371372 Gene

No disorders were found for LOC105371372 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371372 Gene

Publications for LOC105371372 Gene

No publications were found for LOC105371372 Gene.

No data available for Mastermind for LOC105371372 Gene

Products for LOC105371372 Gene

Sources for LOC105371372 Gene