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Aliases for LOC105371335 Gene

Subcategory (RNA class) for LOC105371335 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371335 Gene

  • Uncharacterized LOC105371335 3

External Ids for LOC105371335 Gene

Previous GeneCards Identifiers for LOC105371335 Gene

  • GC16U902258

Summaries for LOC105371335 Gene

GeneCards Summary for LOC105371335 Gene

LOC105371335 (Uncharacterized LOC105371335) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371335 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371335 Gene

Genomics for LOC105371335 Gene

GeneHancer (GH) Regulatory Elements for LOC105371335 Gene

Promoters and enhancers for LOC105371335 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J071515 Enhancer 0.8 Ensembl ENCODE 600.7 +1.3 1290 0.6 SP1 RXRA FOXA2 JUND YY1 ZBTB33 GABPA NR2F2 RAD21 HNF4A LOC105371335 ENSG00000260520 ZNF23 CHST4 ZNF19
GH16J071499 Enhancer 0.9 Ensembl ENCODE 0.4 -13.8 -13811 0.4 ELF3 CTCF RAD21 ARID2 REST TRIM22 IRF2 RFX3 MAFK ZBTB25 ZNF23 ENSG00000247324 CALB2 ENSG00000261611 LOC105371335 ZNF19
GH16J071492 Enhancer 0.8 ENCODE 0.3 -21.6 -21578 0.2 ZKSCAN8 CBFA2T2 BACH1 MAFK TRIM24 SMARCA4 GMEB1 DPF2 NFE2L2 ATF1 ZNF23 ENSG00000247324 CALB2 TAT ENSG00000261611 LOC105371335 ZNF19
GH16J071489 Promoter 0.7 EPDnew 0.3 -24.5 -24467 0.1 GABPB1 ZBTB33 ENSG00000261611 ZNF19 TAT-AS1 LOC105371335
GH16J071503 Enhancer 0.4 Ensembl 0.4 -9.7 -9710 1 FOSL1 FOS ZNF23 ENSG00000247324 TAT LOC105371335 ENSG00000261611 ZNF19
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371335 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371335 Gene

Genomic Locations for LOC105371335 Gene
chr16:71,513,811-71,517,852
(GRCh38/hg38)
Size:
4,042 bases
Orientation:
Plus strand

Genomic View for LOC105371335 Gene

Genes around LOC105371335 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371335 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371335 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371335 Gene

Proteins for LOC105371335 Gene

Post-translational modifications for LOC105371335 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371335 Gene

Domains & Families for LOC105371335 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371335 Gene

Function for LOC105371335 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371335 Gene

Localization for LOC105371335 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371335 Gene

Pathways & Interactions for LOC105371335 Gene

PathCards logo

SuperPathways for LOC105371335 Gene

No Data Available

Interacting Proteins for LOC105371335 Gene

Gene Ontology (GO) - Biological Process for LOC105371335 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371335 Gene

Drugs & Compounds for LOC105371335 Gene

No Compound Related Data Available

Transcripts for LOC105371335 Gene

mRNA/cDNA for LOC105371335 Gene

(2) Additional mRNA sequences :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371335 Gene

No ASD Table

Relevant External Links for LOC105371335 Gene

GeneLoc Exon Structure for
LOC105371335

Expression for LOC105371335 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371335 Gene

Orthologs for LOC105371335 Gene

No data available for Orthologs and Evolution for LOC105371335 Gene

Paralogs for LOC105371335 Gene

No data available for Paralogs for LOC105371335 Gene

Variants for LOC105371335 Gene

Sequence variations from dbSNP and Humsavar for LOC105371335 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000906598 -- 71,513,732(+) T/C upstream_transcript_variant
rs1001744335 -- 71,516,662(+) C/G/T intron_variant
rs1002348999 -- 71,518,157(+) G/A downstream_transcript_variant
rs1002403228 -- 71,512,160(+) C/T upstream_transcript_variant
rs1002403909 -- 71,513,230(+) C/G upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371335 Gene

Disorders for LOC105371335 Gene

No disorders were found for LOC105371335 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371335 Gene

Publications for LOC105371335 Gene

No publications were found for LOC105371335 Gene.

No data available for External Links for LOC105371335 Gene

Products for LOC105371335 Gene

Sources for LOC105371335 Gene

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