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Aliases for LOC105371332 Gene

Subcategory (RNA class) for LOC105371332 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371332 Gene

  • Uncharacterized LOC105371332 3

External Ids for LOC105371332 Gene

Previous GeneCards Identifiers for LOC105371332 Gene

  • GC16U902085

Summaries for LOC105371332 Gene

GeneCards Summary for LOC105371332 Gene

LOC105371332 (Uncharacterized LOC105371332) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371332 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371332 Gene

Genomics for LOC105371332 Gene

GeneHancer (GH) Regulatory Elements for LOC105371332 Gene

Promoters and enhancers for LOC105371332 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J071367 Enhancer 0.9 FANTOM5 ENCODE 0.3 +24.7 24729 0.4 CTCF CSDE1 RFX1 ZNF143 REST ZNF692 GTF2F1 SOX6 CTBP1 BMI1 CALB2 LOC105371332
GH16J071387 Enhancer 0.7 Ensembl ENCODE 0.4 +5.3 5335 2.8 SP1 ZNF148 USF1 TEAD4 CBFA2T3 CALB2 ZNF19 HPR ENSG00000260593 CHST4 LOC105371332
GH16J071413 Enhancer 0.8 ENCODE 0.3 -20.8 -20777 0.2 ELF3 CTCF SP5 RAD21 GLIS2 IKZF1 GATAD2A REST TRIM22 EGR1 ENSG00000247324 ZNF23 CALB2 ZNF19 ENSG00000262120 LINC02136 LOC105371332
GH16J071383 Enhancer 0.6 Ensembl ENCODE 0.4 +8.7 8662 1 RFX1 BMI1 CALB2 ZNF23 HPR TAT-AS1 LOC105371332
GH16J071412 Enhancer 0.7 ENCODE 0.3 -20.3 -20307 0.2 CTCF NFIB GLIS2 ZNF157 RUNX3 ZNF580 ZNF777 ZNF654 ZNF143 GLIS1 ZNF23 ZNF19 ENSG00000262120 LINC02136 LOC105371332
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371332 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371332 Gene

Genomic Locations for LOC105371332 Gene
chr16:71,366,589-71,392,136
(GRCh38/hg38)
Size:
25,548 bases
Orientation:
Minus strand

Genomic View for LOC105371332 Gene

Genes around LOC105371332 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371332 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371332 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371332 Gene

Proteins for LOC105371332 Gene

Post-translational modifications for LOC105371332 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371332 Gene

Domains & Families for LOC105371332 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371332 Gene

Function for LOC105371332 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371332 Gene

Localization for LOC105371332 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371332 Gene

Pathways & Interactions for LOC105371332 Gene

PathCards logo

SuperPathways for LOC105371332 Gene

No Data Available

Interacting Proteins for LOC105371332 Gene

Gene Ontology (GO) - Biological Process for LOC105371332 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371332 Gene

Drugs & Compounds for LOC105371332 Gene

No Compound Related Data Available

Transcripts for LOC105371332 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371332 Gene

No ASD Table

Relevant External Links for LOC105371332 Gene

GeneLoc Exon Structure for
LOC105371332

No data available for mRNA/cDNA for LOC105371332 Gene

Expression for LOC105371332 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371332 Gene

Orthologs for LOC105371332 Gene

No data available for Orthologs and Evolution for LOC105371332 Gene

Paralogs for LOC105371332 Gene

No data available for Paralogs for LOC105371332 Gene

Variants for LOC105371332 Gene

Sequence variations from dbSNP and Humsavar for LOC105371332 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000171033 -- 71,374,145(-) A/C intron_variant
rs1000201374 -- 71,368,235(-) C/T intron_variant
rs1000226297 -- 71,383,263(-) C/A intron_variant
rs1000280269 -- 71,379,937(-) T/C intron_variant
rs1000449278 -- 71,377,051(-) C/T non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371332 Gene

Disorders for LOC105371332 Gene

No disorders were found for LOC105371332 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371332 Gene

Publications for LOC105371332 Gene

No publications were found for LOC105371332 Gene.

No data available for External Links for LOC105371332 Gene

Products for LOC105371332 Gene

Sources for LOC105371332 Gene

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