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Aliases for LOC105371296 Gene

Subcategory (RNA class) for LOC105371296 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371296 Gene

  • Uncharacterized LOC105371296 3

External Ids for LOC105371296 Gene

Previous GeneCards Identifiers for LOC105371296 Gene

  • GC16U901958

Summaries for LOC105371296 Gene

GeneCards Summary for LOC105371296 Gene

LOC105371296 (Uncharacterized LOC105371296) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371296 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371296 Gene

Genomics for LOC105371296 Gene

GeneHancer (GH) Regulatory Elements for LOC105371296 Gene

Promoters and enhancers for LOC105371296 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J058881 Promoter/Enhancer 1.2 Ensembl ENCODE 0.7 -2.1 -2136 0.8 MLLT1 IKZF1 BACH1 IKZF2 TRIM22 DPF2 RUNX3 ELF1 BMI1 HDGF LOC105371296 GC16M058874 ENSG00000245768
GH16J058883 Promoter 0.8 Ensembl 0.7 -2.7 -2720 0.2 IKZF2 RUNX3 IKZF1 POLR2A GC16M058874 LOC105371296 ENSG00000245768
GH16J058859 Enhancer 1.1 Ensembl ENCODE 0.3 +20.2 20238 1.7 CC2D1A CBFA2T2 MLLT1 MAFK TRIM24 ZNF639 SMARCA4 MTA1 DPF2 IKZF1 GC16P058843 LOC105371296 ENSG00000261638 ENSG00000245768
GH16J058848 Enhancer 1 FANTOM5 Ensembl 0.3 +32.0 31980 1.6 ELF3 CEBPG SP1 ZNF644 RXRA CEBPA GATAD2A NFKBIZ GABPA SOX13 GC16P058843 ENSG00000261638 LOC105371296 ENSG00000245768
GH16J058854 Enhancer 0.9 Ensembl ENCODE 0.3 +25.4 25440 2.3 ZNF687 RELA CREM MLLT1 IKZF1 BACH1 IKZF2 PKNOX1 ZNF316 EZH2 GC16P058843 ENSG00000261638 LOC105371296 ENSG00000245768
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371296 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371296 Gene

Genomic Locations for LOC105371296 Gene
chr16:58,847,743-58,880,381
(GRCh38/hg38)
Size:
32,639 bases
Orientation:
Minus strand

Genomic View for LOC105371296 Gene

Genes around LOC105371296 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371296 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371296 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371296 Gene

Proteins for LOC105371296 Gene

Post-translational modifications for LOC105371296 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371296 Gene

Domains & Families for LOC105371296 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371296 Gene

Function for LOC105371296 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371296 Gene

Localization for LOC105371296 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371296 Gene

Pathways & Interactions for LOC105371296 Gene

PathCards logo

SuperPathways for LOC105371296 Gene

No Data Available

Interacting Proteins for LOC105371296 Gene

Gene Ontology (GO) - Biological Process for LOC105371296 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371296 Gene

Drugs & Compounds for LOC105371296 Gene

No Compound Related Data Available

Transcripts for LOC105371296 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371296 Gene

No ASD Table

Relevant External Links for LOC105371296 Gene

GeneLoc Exon Structure for
LOC105371296

No data available for mRNA/cDNA for LOC105371296 Gene

Expression for LOC105371296 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371296 Gene

Orthologs for LOC105371296 Gene

No data available for Orthologs and Evolution for LOC105371296 Gene

Paralogs for LOC105371296 Gene

No data available for Paralogs for LOC105371296 Gene

Variants for LOC105371296 Gene

Sequence variations from dbSNP and Humsavar for LOC105371296 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000111396 -- 58,853,252(-) A/G intron_variant
rs1000143535 -- 58,866,336(-) G/A intron_variant
rs1000232365 -- 58,869,387(-) G/A intron_variant
rs1000249078 -- 58,853,008(-) A/G intron_variant
rs1000267887 -- 58,858,452(-) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371296 Gene

Disorders for LOC105371296 Gene

No disorders were found for LOC105371296 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371296 Gene

Publications for LOC105371296 Gene

No publications were found for LOC105371296 Gene.

No data available for External Links for LOC105371296 Gene

Products for LOC105371296 Gene

Sources for LOC105371296 Gene

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